Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G438400.1 | Wheat | nucleus | 93.34 | 93.34 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 81.96 | 81.68 |
| Os01t0885300-01 | Rice | nucleus | 47.46 | 47.29 |
| EES03998 | Sorghum | nucleus | 42.21 | 42.5 |
| Zm00001d042598_P003 | Maize | mitochondrion | 37.83 | 33.59 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 38.35 | 29.96 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 19.96 | 21.35 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 19.09 | 20.68 |
| KRG99370 | Soybean | nucleus | 7.18 | 16.94 |
| KRH33693 | Soybean | nucleus | 6.3 | 16.9 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 15.94 | 16.46 |
| KRH16191 | Soybean | nucleus | 10.51 | 16.22 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 14.71 | 16.09 |
| KRH69438 | Soybean | nucleus | 13.84 | 15.74 |
| PGSC0003DMT400004849 | Potato | nucleus | 12.26 | 15.56 |
| Solyc02g067950.2.1 | Tomato | extracellular | 13.13 | 15.12 |
| KRG99221 | Soybean | nucleus | 12.43 | 14.88 |
| KRH45764 | Soybean | nucleus | 12.43 | 14.73 |
| Solyc02g093720.2.1 | Tomato | nucleus | 12.78 | 14.57 |
| PGSC0003DMT400032926 | Potato | nucleus | 12.78 | 14.29 |
| KRH74704 | Soybean | nucleus | 13.49 | 14.18 |
| Solyc05g006490.2.1 | Tomato | nucleus | 14.89 | 14.12 |
| PGSC0003DMT400017939 | Potato | nucleus | 12.26 | 14.11 |
| KRH07049 | Soybean | nucleus | 12.26 | 14.03 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 11.73 | 13.87 |
| KRH57609 | Soybean | nucleus | 15.06 | 13.83 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.84 | 13.26 |
| KRG94005 | Soybean | nucleus | 14.54 | 12.61 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.71 | 11.76 |
| KRH31410 | Soybean | nucleus | 12.08 | 11.16 |
| PGSC0003DMT400031254 | Potato | nucleus | 12.61 | 11.16 |
| KRG97481 | Soybean | nucleus | 12.61 | 11.01 |
| Solyc05g014270.2.1 | Tomato | nucleus | 12.61 | 10.81 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G400000.1 | EnsemblPlantsGene:TraesCS3D01G400000 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:+:515001928..515005256
Molecular Weight (calculated)
61796.9 Da
IEP (calculated)
10.661
GRAVY (calculated)
-0.933
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQTFF AWSQGETTDL GVSEGVSVSQ TLNHGSVSFG RFELESLSWE KWSVFSNDKR HEEFVKFNGL VAQKKAYFEE YYKKIRELKA SQQQIQQTEL
101: TLEYSGDGSD SSQTEDMPAE ELETPTGSGT IVYDYVEGAA HETTSEQGMQ CYHDHEDEDF RNELSSSNLV SEARISQQTD QDGRKNALGD NSDSADVENA
201: GFGHDGLGAA HENARAPRRN TEKDPRLRYA SMIIPKSVKT VAGSPLDRTS VTKTPGSVKP NMITNQKTKT NNVRSSSVAS QKMAGAPRTR RITEKEALGV
301: TGVKRPSSAA GRVTSIGEKH PITRATAKKP ADVSTPGRPS TAERRPVTRE RAQKQAAVAT PCRPSTSERR PVDRGSAAKR SDVEGTRRPS TGERPSVTRD
401: SVRTPSKTAA SSVAHPKVTS TTVSTLKRPA PLNATTKSTK PEPKSNIRGS KDASTLQSHL TRPARMDLQV AGKQKSSSVN LPARKMLSSS VGEATFARLK
501: KKEGIPATGQ SRASASKKTT PLQTGNTKSR APNPPTPPPP PRRPSRTTSK PTVSGSSVGG RKPKASTTQW H
101: TLEYSGDGSD SSQTEDMPAE ELETPTGSGT IVYDYVEGAA HETTSEQGMQ CYHDHEDEDF RNELSSSNLV SEARISQQTD QDGRKNALGD NSDSADVENA
201: GFGHDGLGAA HENARAPRRN TEKDPRLRYA SMIIPKSVKT VAGSPLDRTS VTKTPGSVKP NMITNQKTKT NNVRSSSVAS QKMAGAPRTR RITEKEALGV
301: TGVKRPSSAA GRVTSIGEKH PITRATAKKP ADVSTPGRPS TAERRPVTRE RAQKQAAVAT PCRPSTSERR PVDRGSAAKR SDVEGTRRPS TGERPSVTRD
401: SVRTPSKTAA SSVAHPKVTS TTVSTLKRPA PLNATTKSTK PEPKSNIRGS KDASTLQSHL TRPARMDLQV AGKQKSSSVN LPARKMLSSS VGEATFARLK
501: KKEGIPATGQ SRASASKKTT PLQTGNTKSR APNPPTPPPP PRRPSRTTSK PTVSGSSVGG RKPKASTTQW H
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.