CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45764	Soybean	nucleus	51.36	50.83
KRH33693	Soybean	nucleus	19.08	42.72
KRH25750	Soybean	cytosol	8.39	39.22
KRH74704	Soybean	nucleus	41.3	36.28
CDY46410	Canola	cytosol	12.37	36.2
KRH69438	Soybean	nucleus	37.95	36.06
VIT_01s0026g00960.t01	Wine grape	nucleus	33.54	31.19
Zm00001d024922_P001	Maize	nucleus	6.08	28.43
CDY38789	Canola	nucleus	17.19	27.52
Bra016318.1-P	Field mustard	nucleus	27.88	27.25
PGSC0003DMT400004849	Potato	nucleus	25.58	27.11
CDY11620	Canola	nucleus	26.83	26.12
CDY16238	Canola	nucleus	27.46	25.89
CDY14672	Canola	nucleus	26.62	25.6
AT1G24160.1	Thale cress	nucleus	28.93	25.56
Bra024641.1-P	Field mustard	nucleus	26.62	25.15
Bra016236.1-P	Field mustard	nucleus	24.95	24.69
KRG99370	Soybean	nucleus	12.16	23.97
AT1G70100.3	Thale cress	nucleus	24.53	23.21
KRH16191	Soybean	nucleus	17.61	22.7
Solyc04g005060.2.1	Tomato	nucleus	14.05	17.91
HORVU2Hr1G014490.1	Barley	plastid	6.5	16.94
KRH07049	Soybean	nucleus	16.77	16.03
GSMUA_Achr6P03270_001	Banana	nucleus	13.84	15.9
PGSC0003DMT400058225	Potato	nucleus	18.24	14.6
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	6.29	14.49
KRH57609	Soybean	nucleus	18.66	14.31
KRG94005	Soybean	nucleus	19.29	13.98
Os12t0273700-01	Rice	nucleus	11.74	13.97
TraesCS2B01G104800.2	Wheat	nucleus	13.84	13.66
OQU79091	Sorghum	nucleus	11.53	13.32
KRG97481	Soybean	nucleus	18.24	13.3
Os01t0885300-01	Rice	nucleus	15.93	13.26
KRH50366	Soybean	nucleus	16.98	13.24
Solyc05g006490.2.1	Tomato	nucleus	16.56	13.12
Zm00001d023630_P005	Maize	nucleus	12.79	13.09
TraesCS2D01G087000.1	Wheat	nucleus	13.21	13.04
GSMUA_Achr6P24150_001	Banana	nucleus	12.37	13.02
TraesCS3B01G438400.1	Wheat	nucleus	15.51	12.96
GSMUA_Achr7P23570_001	Banana	nucleus	14.47	12.92
EES06976	Sorghum	nucleus	14.26	12.9
EES03998	Sorghum	nucleus	15.09	12.7
TraesCS3D01G400000.1	Wheat	nucleus	14.88	12.43
KRG89293	Soybean	nucleus	16.35	12.23
TraesCS2A01G089100.1	Wheat	nucleus	8.39	12.12
TraesCS6D01G153200.1	Wheat	nucleus	14.05	12.12
TraesCS3A01G404700.2	Wheat	nucleus	14.26	11.87
Zm00001d016849_P002	Maize	nucleus	13.42	11.49
KRH31410	Soybean	nucleus	14.88	11.49
TraesCS6A01G159300.1	Wheat	nucleus	13.21	11.39
GSMUA_Achr6P18450_001	Banana	nucleus	12.58	11.39
TraesCS6B01G192000.1	Wheat	nucleus	13.0	11.21
HORVU6Hr1G033310.33	Barley	cytosol	14.05	11.19
Zm00001d042598_P003	Maize	mitochondrion	14.88	11.04
Os02t0558600-01	Rice	nucleus	12.79	10.29
Os05t0420500-01	Rice	nucleus	13.84	9.28
EES18249	Sorghum	nucleus	14.68	9.13
TraesCS1B01G273800.1	Wheat	nucleus	13.63	8.89
TraesCS1A01G263200.1	Wheat	nucleus	13.42	8.77
HORVU1Hr1G063930.1	Barley	nucleus	13.42	8.77
TraesCS1D01G263300.1	Wheat	nucleus	13.21	8.62
Zm00001d038217_P002	Maize	nucleus	13.21	8.36
HORVU2Hr1G014550.1	Barley	cytosol	6.5	5.65

Protein Annotations

EMBL:ACUP02011006	EnsemblPlants:KRG99221	EnsemblPlantsGene:GLYMA_18G130700	EntrezGene:100815002	ncoils:Coil	PANTHER:PTHR31358
PANTHER:PTHR31358:SF17	ProteinID:KRG99221	ProteinID:KRG99221.1	ProteinID:KRG99222.1	SEG:seg	UniParc:UPI000233E858
UniProt:K7MRS7	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:18196170..18201934

Molecular Weight (calculated)

53236.0 Da

IEP (calculated)

9.491

GRAVY (calculated)

-1.064

Length

477 amino acids

Sequence
(BLAST)

001: MGETAASNPA LQVSVSFGRF ENDSLSWEKW SAFSPNKYLE EVEKCATPGS VAQKKAYFEA HYKNVAARKA ELLAQAKQTE KDSPRSQHQN GEDLSCNTCW
101: TDAECDDTQG SREGVKVKQE TNSIGEIVRT DESNLEEDVA VSRDYQGSSV EGEKENEELE SRSGSSQIEK LEEVVCIEQG ESKEESRNVE AEDVKEIPHN
201: VNKEPAQASE IEAKYVALDH PKVTPVNRES NATKTKKKSM LSTSKPKASQ FSTPRSSNPT TTPTKTLASA SSTKRGNSPS ISWRKITSTA ENRKVPNKSL
301: HMSHSLAPSQ PDPAPHTTMR KSLIMEKMGD KDIVKRAFKT FQNNFNQRKT SAENKSLVKE KVPSEVTETR NPTSIALRKE NGQSPKVDSM DRKSANAVRT
401: AFGLKSDVRA EKGKEFPRKI EEKLNAKEVE RMHLQLKSKE EKIKHNTKAT PLAAFHRCQK ASKSHPEKGD AKIDKWR

Best Arabidopsis Sequence Match ( AT1G24160.1 )
(BLAST)

001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL

Arabidopsis Description

F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.