Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79091 | Sorghum | nucleus | 58.37 | 65.86 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 28.76 | 27.74 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 26.18 | 25.26 |
| Os12t0273700-01 | Rice | nucleus | 21.67 | 25.19 |
| Zm00001d024922_P001 | Maize | nucleus | 5.36 | 24.51 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 13.95 | 19.7 |
| KRH33693 | Soybean | nucleus | 8.58 | 18.78 |
| KRG99370 | Soybean | nucleus | 8.37 | 16.12 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 7.08 | 15.94 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 10.94 | 13.82 |
| PGSC0003DMT400017939 | Potato | nucleus | 14.59 | 13.71 |
| KRH07049 | Soybean | nucleus | 13.73 | 12.83 |
| KRG99221 | Soybean | nucleus | 13.09 | 12.79 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 11.37 | 12.77 |
| Solyc02g067950.2.1 | Tomato | extracellular | 13.52 | 12.7 |
| CDX99732 | Canola | nucleus | 14.38 | 12.55 |
| KRH45764 | Soybean | nucleus | 12.66 | 12.24 |
| KRH69438 | Soybean | nucleus | 13.09 | 12.15 |
| KRH31410 | Soybean | nucleus | 16.09 | 12.14 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.3 | 12.13 |
| Solyc02g093720.2.1 | Tomato | nucleus | 12.88 | 11.98 |
| CDY40987 | Canola | nucleus | 14.59 | 11.83 |
| KRH16191 | Soybean | nucleus | 9.23 | 11.62 |
| Bra036350.1-P | Field mustard | nucleus | 13.52 | 11.31 |
| KRH74704 | Soybean | nucleus | 12.88 | 11.05 |
| KRH57609 | Soybean | nucleus | 14.59 | 10.93 |
| AT3G26050.1 | Thale cress | nucleus | 12.45 | 10.88 |
| PGSC0003DMT400004849 | Potato | nucleus | 9.87 | 10.22 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.09 | 10.13 |
| Zm00001d042598_P003 | Maize | mitochondrion | 13.95 | 10.11 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 11.59 | 9.84 |
| KRG97481 | Soybean | nucleus | 13.73 | 9.79 |
| Zm00001d016849_P002 | Maize | nucleus | 11.59 | 9.69 |
| PGSC0003DMT400058225 | Potato | nucleus | 11.59 | 9.06 |
| PGSC0003DMT400031254 | Potato | nucleus | 12.45 | 8.99 |
| KRG94005 | Soybean | nucleus | 12.66 | 8.97 |
| Solyc05g014270.2.1 | Tomato | nucleus | 12.66 | 8.86 |
| Zm00001d038217_P002 | Maize | nucleus | 12.02 | 7.43 |
| Solyc04g005060.2.1 | Tomato | nucleus | 5.58 | 6.95 |
Protein Annotations
| EnsemblPlants:Zm00001d023630_P005 | EnsemblPlants:Zm00001d023630_T005 | EnsemblPlantsGene:Zm00001d023630 | EntrezGene:100278361 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF27 |
| ProteinID:AQK39676.1 | SEG:seg | UniParc:UPI00022097B1 | UniProt:K7TMY7 | MapMan:35.2 | : |
Description
TPX2 (targeting protein for Xklp2) protein family
Coordinates
chr10:+:12787782..12796731
Molecular Weight (calculated)
50457.2 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.722
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAEPVDFSP PPPPEPTLSP EPEISGKDRG GNWKADMMSA LGESVSFGRF LSEPLEWGKR SAFAHNRYLE EAAVQARPGS VAQKKAFFEA HYARKKRKSE
101: DHAAAASDDV AGGDGELEAA EDGGAASWSL SATESSCMTD EPPAPAEEVC CGWEEDRVVD CGGSASDKPV HVPEELADIT DAVGPCCRMD APTDETQHME
201: GGDEVVGAVL PLQKQDLCMD SLTAVDATLK EISILNQDIT DSVKRRRIQM ASLLPKPAKL SSPPTAKKGQ NSSAKRRSMR HSAKENNSPP SAGSNKLRTT
301: STPKKRSTLS ALHMSMSFPR CESGNTSMAS RNLGTTIAAR ISELEHANAT KPAEKNTKPH DLRLPRKKFS SALPEIAPRT SQVDEERSSH IMKIKEKLFG
401: STFPTLHQKY GITKEKEATQ EILSSSKSGH LSRDINQAHQ TGKDAQTSKD ASDAKQICCF PLRKMY
101: DHAAAASDDV AGGDGELEAA EDGGAASWSL SATESSCMTD EPPAPAEEVC CGWEEDRVVD CGGSASDKPV HVPEELADIT DAVGPCCRMD APTDETQHME
201: GGDEVVGAVL PLQKQDLCMD SLTAVDATLK EISILNQDIT DSVKRRRIQM ASLLPKPAKL SSPPTAKKGQ NSSAKRRSMR HSAKENNSPP SAGSNKLRTT
301: STPKKRSTLS ALHMSMSFPR CESGNTSMAS RNLGTTIAAR ISELEHANAT KPAEKNTKPH DLRLPRKKFS SALPEIAPRT SQVDEERSSH IMKIKEKLFG
401: STFPTLHQKY GITKEKEATQ EILSSSKSGH LSRDINQAHQ TGKDAQTSKD ASDAKQICCF PLRKMY
001: MAESAVLFHS YSFAAPPSRN ESHEDNTMHA LSQSVSFGRF MTENLEWGKW SSFSHKKYVD EAEKFSQPGS VAQKKAFFEA HYKKIAEAKK AKASDQSSDS
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLR
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLR
Arabidopsis Description
At5g40700 [Source:UniProtKB/TrEMBL;Acc:Q5PP69]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.