Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400031254 | Potato | nucleus | 38.44 | 39.69 |
CDX99631 | Canola | cytosol | 6.01 | 27.59 |
Zm00001d024922_P001 | Maize | nucleus | 4.05 | 26.47 |
Solyc02g067950.2.1 | Tomato | extracellular | 17.72 | 23.79 |
CDX83685 | Canola | nucleus | 8.56 | 22.89 |
CDY13707 | Canola | nucleus | 8.71 | 22.83 |
Solyc02g093720.2.1 | Tomato | nucleus | 17.12 | 22.75 |
Bra025270.1-P | Field mustard | nucleus | 8.56 | 22.53 |
CDY48358 | Canola | nucleus | 9.01 | 21.51 |
CDY42558 | Canola | nucleus | 9.16 | 20.82 |
Bra025552.1-P | Field mustard | nucleus | 9.16 | 20.68 |
AT5G40700.2 | Thale cress | nucleus, plastid | 9.31 | 20.46 |
Bra033005.1-P | Field mustard | nucleus | 8.56 | 20.43 |
CDY34153 | Canola | nucleus | 8.56 | 20.43 |
AT3G27350.2 | Thale cress | cytosol, nucleus, plastid | 9.46 | 19.75 |
CDY36374 | Canola | nucleus | 9.46 | 18.75 |
CDX67471 | Canola | nucleus | 8.26 | 18.03 |
Bra028471.1-P | Field mustard | nucleus | 8.26 | 18.03 |
CDY11706 | Canola | nucleus | 7.96 | 17.38 |
HORVU2Hr1G014490.1 | Barley | plastid | 4.65 | 16.94 |
EES06976 | Sorghum | nucleus | 12.01 | 15.18 |
GSMUA_Achr6P24150_001 | Banana | nucleus | 10.21 | 15.01 |
Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 4.65 | 14.98 |
GSMUA_Achr6P18450_001 | Banana | nucleus | 11.26 | 14.23 |
Solyc05g006490.2.1 | Tomato | nucleus | 12.76 | 14.12 |
Solyc05g008090.2.1 | Tomato | nucleus | 14.41 | 14.01 |
Os01t0885300-01 | Rice | nucleus | 11.56 | 13.44 |
TraesCS2D01G087000.1 | Wheat | nucleus | 9.61 | 13.25 |
TraesCS6A01G159300.1 | Wheat | nucleus | 10.96 | 13.2 |
Zm00001d016849_P002 | Maize | nucleus | 10.96 | 13.11 |
TraesCS6D01G153200.1 | Wheat | nucleus | 10.81 | 13.02 |
TraesCS6B01G192000.1 | Wheat | nucleus | 10.81 | 13.02 |
GSMUA_Achr7P23570_001 | Banana | nucleus | 10.36 | 12.92 |
CDY15926 | Canola | plastid | 4.8 | 12.9 |
Os02t0558600-01 | Rice | nucleus | 11.41 | 12.82 |
TraesCS3B01G438400.1 | Wheat | nucleus | 10.96 | 12.78 |
TraesCS3A01G404700.2 | Wheat | nucleus | 10.96 | 12.74 |
EES03998 | Sorghum | nucleus | 10.81 | 12.7 |
Zm00001d023630_P005 | Maize | nucleus | 8.86 | 12.66 |
TraesCS3D01G400000.1 | Wheat | nucleus | 10.81 | 12.61 |
GSMUA_Achr6P03270_001 | Banana | nucleus | 7.81 | 12.53 |
TraesCS2B01G104800.2 | Wheat | nucleus | 9.01 | 12.42 |
Zm00001d042598_P003 | Maize | mitochondrion | 11.71 | 12.13 |
OQU79091 | Sorghum | nucleus | 7.21 | 11.62 |
TraesCS2A01G089100.1 | Wheat | nucleus | 5.71 | 11.52 |
HORVU6Hr1G033310.33 | Barley | cytosol | 9.91 | 11.02 |
Os12t0273700-01 | Rice | nucleus | 6.31 | 10.47 |
Solyc04g005060.2.1 | Tomato | nucleus | 5.86 | 10.43 |
Zm00001d038217_P002 | Maize | nucleus | 11.71 | 10.34 |
Os05t0420500-01 | Rice | nucleus | 10.96 | 10.27 |
EES18249 | Sorghum | nucleus | 11.56 | 10.04 |
TraesCS1D01G263300.1 | Wheat | nucleus | 10.66 | 9.71 |
TraesCS1B01G273800.1 | Wheat | nucleus | 10.66 | 9.71 |
TraesCS1A01G263200.1 | Wheat | nucleus | 10.51 | 9.59 |
HORVU1Hr1G063930.1 | Barley | nucleus | 10.06 | 9.18 |
HORVU2Hr1G014550.1 | Barley | cytosol | 4.35 | 5.28 |
Protein Annotations
EnsemblPlants:Solyc05g014270.2.1 | EnsemblPlantsGene:Solyc05g014270.2 | InterPro:TPX2_C | ncoils:Coil | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 |
PFAM:PF06886 | SEG:seg | UniParc:UPI00027664BC | UniProt:K4BYE7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5:-:8049432..8054756
Molecular Weight (calculated)
74426.0 Da
IEP (calculated)
10.119
GRAVY (calculated)
-1.013
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESSSSSAC LVRSFSQPSQ ERTEGDPLYR ALSTSVSFGR FMSESLDWEK WSSFTHNRYL EEVGKYAKPG SVAEKKSYFE AQHKKAAAKK AALLLEQQNA
101: AVDKSSDLNV TNQNNDHYTG NSELTEPSSC VGIEETQREE GELNVTTQII DMESELTENG SYEGTEEALG DQDPLNVTNP TVDHCTMRFE LPQNRSHMGI
201: EEVQGNEGDN TTTCGSYPIH EEINLETTGT ENSIKQSYPV ENELKSLNQQ ENVVVVVEVS ENVQQLKEKT QTKNVAMEGD SMLSTKKKPK KPLTLTTRLT
301: TKNDSSKFKS RVKPVTALQP IATDKSAPTN RSNGKVMIDK KKSNPKSRQM SIKFFSHREE TKKLMSPILE KIVNSRFVRS ITKTSRDSKI QQTSTLASVS
401: GISKRPPEAP QRANKRYRTK LDQSLSRSRK EEGELVSHSR NLKSINKHGN VACSSPTVFS PFSLRSEERA AKRREFFQKL EQKLNTKEAE KEQQQAKPKA
501: NATSSSKVLI SRAKPNPSIH HERESSSNQM KKGKATSSSK VLISGAKPDP SIHQERESSS NQMKKEKTTS SSKVLTTRAK PNSSIHQERE ISNNQMKKEK
601: APTSSKVHTT RAKPNVIHQS RAESNASIHR EREPSSTALN HQSRAELNAS IHRERESLNA TTTLLS
101: AVDKSSDLNV TNQNNDHYTG NSELTEPSSC VGIEETQREE GELNVTTQII DMESELTENG SYEGTEEALG DQDPLNVTNP TVDHCTMRFE LPQNRSHMGI
201: EEVQGNEGDN TTTCGSYPIH EEINLETTGT ENSIKQSYPV ENELKSLNQQ ENVVVVVEVS ENVQQLKEKT QTKNVAMEGD SMLSTKKKPK KPLTLTTRLT
301: TKNDSSKFKS RVKPVTALQP IATDKSAPTN RSNGKVMIDK KKSNPKSRQM SIKFFSHREE TKKLMSPILE KIVNSRFVRS ITKTSRDSKI QQTSTLASVS
401: GISKRPPEAP QRANKRYRTK LDQSLSRSRK EEGELVSHSR NLKSINKHGN VACSSPTVFS PFSLRSEERA AKRREFFQKL EQKLNTKEAE KEQQQAKPKA
501: NATSSSKVLI SRAKPNPSIH HERESSSNQM KKGKATSSSK VLISGAKPDP SIHQERESSS NQMKKEKTTS SSKVLTTRAK PNSSIHQERE ISNNQMKKEK
601: APTSSKVHTT RAKPNVIHQS RAESNASIHR EREPSSTALN HQSRAELNAS IHRERESLNA TTTLLS
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.