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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400031254 Potato nucleus 38.44 39.69
CDX99631 Canola cytosol 6.01 27.59
Zm00001d024922_P001 Maize nucleus 4.05 26.47
Solyc02g067950.2.1 Tomato extracellular 17.72 23.79
CDX83685 Canola nucleus 8.56 22.89
CDY13707 Canola nucleus 8.71 22.83
Solyc02g093720.2.1 Tomato nucleus 17.12 22.75
Bra025270.1-P Field mustard nucleus 8.56 22.53
CDY48358 Canola nucleus 9.01 21.51
CDY42558 Canola nucleus 9.16 20.82
Bra025552.1-P Field mustard nucleus 9.16 20.68
AT5G40700.2 Thale cress nucleus, plastid 9.31 20.46
Bra033005.1-P Field mustard nucleus 8.56 20.43
CDY34153 Canola nucleus 8.56 20.43
AT3G27350.2 Thale cress cytosol, nucleus, plastid 9.46 19.75
CDY36374 Canola nucleus 9.46 18.75
CDX67471 Canola nucleus 8.26 18.03
Bra028471.1-P Field mustard nucleus 8.26 18.03
CDY11706 Canola nucleus 7.96 17.38
HORVU2Hr1G014490.1 Barley plastid 4.65 16.94
EES06976 Sorghum nucleus 12.01 15.18
GSMUA_Achr6P24150_001 Banana nucleus 10.21 15.01
Zm00001d005523_P001 Maize cytosol, extracellular, plastid 4.65 14.98
GSMUA_Achr6P18450_001 Banana nucleus 11.26 14.23
Solyc05g006490.2.1 Tomato nucleus 12.76 14.12
Solyc05g008090.2.1 Tomato nucleus 14.41 14.01
Os01t0885300-01 Rice nucleus 11.56 13.44
TraesCS2D01G087000.1 Wheat nucleus 9.61 13.25
TraesCS6A01G159300.1 Wheat nucleus 10.96 13.2
Zm00001d016849_P002 Maize nucleus 10.96 13.11
TraesCS6D01G153200.1 Wheat nucleus 10.81 13.02
TraesCS6B01G192000.1 Wheat nucleus 10.81 13.02
GSMUA_Achr7P23570_001 Banana nucleus 10.36 12.92
CDY15926 Canola plastid 4.8 12.9
Os02t0558600-01 Rice nucleus 11.41 12.82
TraesCS3B01G438400.1 Wheat nucleus 10.96 12.78
TraesCS3A01G404700.2 Wheat nucleus 10.96 12.74
EES03998 Sorghum nucleus 10.81 12.7
Zm00001d023630_P005 Maize nucleus 8.86 12.66
TraesCS3D01G400000.1 Wheat nucleus 10.81 12.61
GSMUA_Achr6P03270_001 Banana nucleus 7.81 12.53
TraesCS2B01G104800.2 Wheat nucleus 9.01 12.42
Zm00001d042598_P003 Maize mitochondrion 11.71 12.13
OQU79091 Sorghum nucleus 7.21 11.62
TraesCS2A01G089100.1 Wheat nucleus 5.71 11.52
HORVU6Hr1G033310.33 Barley cytosol 9.91 11.02
Os12t0273700-01 Rice nucleus 6.31 10.47
Solyc04g005060.2.1 Tomato nucleus 5.86 10.43
Zm00001d038217_P002 Maize nucleus 11.71 10.34
Os05t0420500-01 Rice nucleus 10.96 10.27
EES18249 Sorghum nucleus 11.56 10.04
TraesCS1D01G263300.1 Wheat nucleus 10.66 9.71
TraesCS1B01G273800.1 Wheat nucleus 10.66 9.71
TraesCS1A01G263200.1 Wheat nucleus 10.51 9.59
HORVU1Hr1G063930.1 Barley nucleus 10.06 9.18
HORVU2Hr1G014550.1 Barley cytosol 4.35 5.28
Protein Annotations
EnsemblPlants:Solyc05g014270.2.1EnsemblPlantsGene:Solyc05g014270.2InterPro:TPX2_Cncoils:CoilPANTHER:PTHR31358PANTHER:PTHR31358:SF12
PFAM:PF06886SEG:segUniParc:UPI00027664BCUniProt:K4BYE7MapMan:35.2:
Description
No Description!
Coordinates
chr5:-:8049432..8054756
Molecular Weight (calculated)
74426.0 Da
IEP (calculated)
10.119
GRAVY (calculated)
-1.013
Length
666 amino acids
Sequence
(BLAST)
001: MGESSSSSAC LVRSFSQPSQ ERTEGDPLYR ALSTSVSFGR FMSESLDWEK WSSFTHNRYL EEVGKYAKPG SVAEKKSYFE AQHKKAAAKK AALLLEQQNA
101: AVDKSSDLNV TNQNNDHYTG NSELTEPSSC VGIEETQREE GELNVTTQII DMESELTENG SYEGTEEALG DQDPLNVTNP TVDHCTMRFE LPQNRSHMGI
201: EEVQGNEGDN TTTCGSYPIH EEINLETTGT ENSIKQSYPV ENELKSLNQQ ENVVVVVEVS ENVQQLKEKT QTKNVAMEGD SMLSTKKKPK KPLTLTTRLT
301: TKNDSSKFKS RVKPVTALQP IATDKSAPTN RSNGKVMIDK KKSNPKSRQM SIKFFSHREE TKKLMSPILE KIVNSRFVRS ITKTSRDSKI QQTSTLASVS
401: GISKRPPEAP QRANKRYRTK LDQSLSRSRK EEGELVSHSR NLKSINKHGN VACSSPTVFS PFSLRSEERA AKRREFFQKL EQKLNTKEAE KEQQQAKPKA
501: NATSSSKVLI SRAKPNPSIH HERESSSNQM KKGKATSSSK VLISGAKPDP SIHQERESSS NQMKKEKTTS SSKVLTTRAK PNSSIHQERE ISNNQMKKEK
601: APTSSKVHTT RAKPNVIHQS RAESNASIHR EREPSSTALN HQSRAELNAS IHRERESLNA TTTLLS
Best Arabidopsis Sequence Match ( AT3G26050.1 )
(BLAST)
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.