Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G400000.1 | Wheat | nucleus | 81.68 | 81.96 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 79.58 | 79.86 |
| Os01t0885300-01 | Rice | nucleus | 43.63 | 43.63 |
| EES03998 | Sorghum | nucleus | 39.97 | 40.39 |
| Zm00001d042598_P003 | Maize | mitochondrion | 36.3 | 32.35 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 32.98 | 25.89 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 20.77 | 22.28 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 19.37 | 21.06 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 16.4 | 18.01 |
| KRH33693 | Soybean | nucleus | 6.46 | 17.37 |
| KRG99370 | Soybean | nucleus | 7.16 | 16.94 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 16.23 | 16.82 |
| KRH16191 | Soybean | nucleus | 10.82 | 16.76 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.61 | 15.26 |
| KRH69438 | Soybean | nucleus | 13.26 | 15.14 |
| KRH07049 | Soybean | nucleus | 13.09 | 15.03 |
| Solyc02g093720.2.1 | Tomato | nucleus | 12.91 | 14.77 |
| PGSC0003DMT400017939 | Potato | nucleus | 12.74 | 14.72 |
| Solyc02g067950.2.1 | Tomato | extracellular | 12.74 | 14.72 |
| KRH45764 | Soybean | nucleus | 12.22 | 14.52 |
| PGSC0003DMT400004849 | Potato | nucleus | 11.34 | 14.44 |
| KRG99221 | Soybean | nucleus | 11.87 | 14.26 |
| KRH74704 | Soybean | nucleus | 12.91 | 13.63 |
| KRH57609 | Soybean | nucleus | 14.66 | 13.5 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.79 | 13.12 |
| KRG94005 | Soybean | nucleus | 14.31 | 12.46 |
| PGSC0003DMT400058225 | Potato | nucleus | 12.74 | 12.25 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 6.98 | 12.12 |
| KRG97481 | Soybean | nucleus | 13.61 | 11.93 |
| KRH31410 | Soybean | nucleus | 12.57 | 11.65 |
| PGSC0003DMT400031254 | Potato | nucleus | 12.57 | 11.16 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.16 | 10.96 |
| Solyc05g014270.2.1 | Tomato | nucleus | 12.74 | 10.96 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G404700.2 | EnsemblPlantsGene:TraesCS3A01G404700 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:+:649631366..649634741
Molecular Weight (calculated)
61929.1 Da
IEP (calculated)
10.649
GRAVY (calculated)
-0.897
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQTFF AWSQGETTDL GVSEGVSVSQ TLNHGSISFG RFELESLSWE KWSVFSNDKR HEEFVKFNGL VAQKKAYFEE YYKKIRELKA SQQQIQQTEL
101: TLEYSGDGSD SSQTEDMPAE ELETPTGSGT IAYDYVEGAA HETTSEQGMQ CYHDHEDEDF RNELSSSNLV SEARISQQTD QDGRENALGG NSDSTVVENA
201: GLGHDGAAYE NARAPRRNTD KDPRLRYASM IIPKSVKTVA GSPLDRTSVT KTPGSVKPSM TTNQKTKTNN VCSSSVASQK MAGTARTRGI TEKEALGVTG
301: VKRPSSAAGR SSIGEKHPIT RATVKKPADL STPGRPSTAE RRPVTRGRAQ KQAAVATPCR PSTSERRSVD RGSAAKRSDV EGTRRPSTGE RRSITRDSVR
401: TPSKTAGSSV AHPKVTKTTA STLKRPAPLN ATTKSTKPEP KSSIRGSKDA STMHSHLTRP ARMDLQVAGK QKSSSVNLPA RKMLSSSVGE ATFARLKKIE
501: GIPATVQSRA STSKKTTPLQ AGNTKSRAPN VRHSFPPTPP PPPRRPSRTT SKPTVSGSSV GGRKPKASTP QWH
101: TLEYSGDGSD SSQTEDMPAE ELETPTGSGT IAYDYVEGAA HETTSEQGMQ CYHDHEDEDF RNELSSSNLV SEARISQQTD QDGRENALGG NSDSTVVENA
201: GLGHDGAAYE NARAPRRNTD KDPRLRYASM IIPKSVKTVA GSPLDRTSVT KTPGSVKPSM TTNQKTKTNN VCSSSVASQK MAGTARTRGI TEKEALGVTG
301: VKRPSSAAGR SSIGEKHPIT RATVKKPADL STPGRPSTAE RRPVTRGRAQ KQAAVATPCR PSTSERRSVD RGSAAKRSDV EGTRRPSTGE RRSITRDSVR
401: TPSKTAGSSV AHPKVTKTTA STLKRPAPLN ATTKSTKPEP KSSIRGSKDA STMHSHLTRP ARMDLQVAGK QKSSSVNLPA RKMLSSSVGE ATFARLKKIE
501: GIPATVQSRA STSKKTTPLQ AGNTKSRAPN VRHSFPPTPP PPPRRPSRTT SKPTVSGSSV GGRKPKASTP QWH
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.