Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058225 | Potato | nucleus | 41.86 | 42.28 |
| CDY46410 | Canola | cytosol | 9.8 | 36.2 |
| Zm00001d024922_P001 | Maize | nucleus | 5.48 | 32.35 |
| KRH33693 | Soybean | nucleus | 9.63 | 27.23 |
| CDY38789 | Canola | nucleus | 11.13 | 22.48 |
| KRG99370 | Soybean | nucleus | 8.47 | 21.07 |
| Bra024641.1-P | Field mustard | nucleus | 17.61 | 20.99 |
| Bra016318.1-P | Field mustard | nucleus | 16.28 | 20.08 |
| KRH16191 | Soybean | nucleus | 11.96 | 19.46 |
| VIT_01s0026g00960.t01 | Wine grape | nucleus | 16.45 | 19.3 |
| KRH45764 | Soybean | nucleus | 15.45 | 19.29 |
| AT1G24160.1 | Thale cress | nucleus | 17.28 | 19.26 |
| AT1G70100.3 | Thale cress | nucleus | 15.95 | 19.05 |
| CDY14672 | Canola | nucleus | 15.61 | 18.95 |
| KRH69438 | Soybean | nucleus | 15.28 | 18.33 |
| Bra016236.1-P | Field mustard | nucleus | 14.62 | 18.26 |
| CDY16238 | Canola | nucleus | 15.28 | 18.18 |
| CDY11620 | Canola | nucleus | 14.78 | 18.16 |
| KRH74704 | Soybean | nucleus | 15.61 | 17.31 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 5.81 | 16.91 |
| KRG99221 | Soybean | nucleus | 13.12 | 16.56 |
| HORVU2Hr1G014490.1 | Barley | plastid | 4.98 | 16.39 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.29 | 15.97 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 14.12 | 14.89 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 13.95 | 14.71 |
| Solyc02g067950.2.1 | Tomato | extracellular | 11.79 | 14.31 |
| EES06976 | Sorghum | nucleus | 12.29 | 14.04 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 10.47 | 13.91 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 13.12 | 13.79 |
| Os12t0273700-01 | Rice | nucleus | 9.14 | 13.72 |
| EES03998 | Sorghum | nucleus | 12.79 | 13.58 |
| Zm00001d042598_P003 | Maize | mitochondrion | 14.45 | 13.53 |
| Zm00001d016849_P002 | Maize | nucleus | 12.29 | 13.29 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 12.13 | 13.2 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 12.13 | 13.2 |
| Os02t0558600-01 | Rice | nucleus | 12.96 | 13.15 |
| Zm00001d023630_P005 | Maize | nucleus | 10.13 | 13.09 |
| Os01t0885300-01 | Rice | nucleus | 12.46 | 13.09 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 11.96 | 13.02 |
| Solyc05g014270.2.1 | Tomato | nucleus | 14.12 | 12.76 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 8.64 | 12.53 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 9.8 | 12.22 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 10.8 | 12.17 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 10.63 | 12.14 |
| OQU79091 | Sorghum | nucleus | 8.31 | 12.11 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 11.79 | 11.85 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 9.3 | 11.59 |
| Solyc05g008090.2.1 | Tomato | nucleus | 12.79 | 11.24 |
| Os05t0420500-01 | Rice | nucleus | 12.29 | 10.41 |
| Zm00001d038217_P002 | Maize | nucleus | 12.13 | 9.68 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 11.63 | 9.58 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 11.46 | 9.45 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 5.15 | 9.39 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 11.3 | 9.3 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 11.13 | 9.18 |
| Solyc04g005060.2.1 | Tomato | nucleus | 5.65 | 9.09 |
| EES18249 | Sorghum | nucleus | 11.3 | 8.87 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 3.65 | 4.01 |
Protein Annotations
| EnsemblPlants:Solyc05g006490.2.1 | EnsemblPlantsGene:Solyc05g006490.2 | ncoils:Coil | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF17 | SEG:seg |
| UniParc:UPI00027673D4 | UniProt:K4BWH5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:-:1112454..1117445
Molecular Weight (calculated)
65267.9 Da
IEP (calculated)
8.937
GRAVY (calculated)
-0.819
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESIVETPA VKHKMGDSVV SRPTLEVSVS FGRFENDALS WEKWSSFSPN KYLEEVEKCS TPGSVAQKKA YFEAHYKRIA AKKLEQLEEE TRQVEQEMEP
101: LSPEVTEPKS GDVTENGNSD GDFSSSNGES SSVDEQQMSV VNLKNSDAVD EPKEDITVGV ECDNLLVTEA KELTISGIDE SKDDTSVDIE CFSPLVTEAK
201: EGTISGIDES NEDISVDLEC DSLVVTKTKE ETILGTCDQG VLNKAEERNL ENVCQDSVVE TPQANTEAQK ASLKKSKTPN ANVKHVPRKV YTPDARVSVG
301: TKKKLTSPVA KSSRISTPTS KQVPTSMVIT PSQPSVKKVT GMSTQRSNTT PLAQRKKLVP GSFVSPSQSS NKKLNGATPS QSSNKKLNGA SPSQSSNKNL
401: NGATPCQSSN KKLNGATSSR SSSKTLNGAA LQRSVNSPVL EDKRRVPTSL HMSLSLSSPN STASTNTMRR SLFMETMGDK DIVKRAFKAF QNSYSQGRSV
501: GDMTYDIQDQ VSSKESEQKI STSSTQKDSE RLRKTPDKVI TLKGQSGTRS ASSSSGAPKD AGVEKKRVNS IRASTSSRID RSTDKWKEEV TKGKIKRPGS
601: NR
101: LSPEVTEPKS GDVTENGNSD GDFSSSNGES SSVDEQQMSV VNLKNSDAVD EPKEDITVGV ECDNLLVTEA KELTISGIDE SKDDTSVDIE CFSPLVTEAK
201: EGTISGIDES NEDISVDLEC DSLVVTKTKE ETILGTCDQG VLNKAEERNL ENVCQDSVVE TPQANTEAQK ASLKKSKTPN ANVKHVPRKV YTPDARVSVG
301: TKKKLTSPVA KSSRISTPTS KQVPTSMVIT PSQPSVKKVT GMSTQRSNTT PLAQRKKLVP GSFVSPSQSS NKKLNGATPS QSSNKKLNGA SPSQSSNKNL
401: NGATPCQSSN KKLNGATSSR SSSKTLNGAA LQRSVNSPVL EDKRRVPTSL HMSLSLSSPN STASTNTMRR SLFMETMGDK DIVKRAFKAF QNSYSQGRSV
501: GDMTYDIQDQ VSSKESEQKI STSSTQKDSE RLRKTPDKVI TLKGQSGTRS ASSSSGAPKD AGVEKKRVNS IRASTSSRID RSTDKWKEEV TKGKIKRPGS
601: NR
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.