CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99221	Soybean	nucleus	50.83	51.36
KRH33693	Soybean	nucleus	21.99	49.77
KRH74704	Soybean	nucleus	46.89	41.62
KRH25750	Soybean	cytosol	8.51	40.2
KRH69438	Soybean	nucleus	40.25	38.65
CDY46410	Canola	cytosol	12.45	36.81
Zm00001d024922_P001	Maize	nucleus	6.22	29.41
KRG99370	Soybean	nucleus	14.52	28.93
Bra024641.1-P	Field mustard	nucleus	29.67	28.32
CDY16238	Canola	nucleus	29.05	27.67
Bra016318.1-P	Field mustard	nucleus	27.8	27.46
AT1G24160.1	Thale cress	nucleus	30.71	27.41
VIT_01s0026g00960.t01	Wine grape	nucleus	29.05	27.29
CDY14672	Canola	nucleus	27.8	27.02
KRH16191	Soybean	nucleus	20.12	26.22
Bra016236.1-P	Field mustard	nucleus	26.14	26.14
AT1G70100.3	Thale cress	nucleus	26.76	25.6
CDY38789	Canola	nucleus	15.77	25.5
PGSC0003DMT400004849	Potato	nucleus	22.61	24.22
CDY11620	Canola	nucleus	24.27	23.88
GSMUA_Achr6P03270_001	Banana	nucleus	14.32	16.63
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	7.05	16.43
HORVU2Hr1G014490.1	Barley	plastid	6.22	16.39
Solyc04g005060.2.1	Tomato	nucleus	12.66	16.31
PGSC0003DMT400058225	Potato	nucleus	19.71	15.94
KRH07049	Soybean	nucleus	16.18	15.63
Solyc05g006490.2.1	Tomato	nucleus	19.29	15.45
KRH57609	Soybean	nucleus	19.29	14.95
KRG94005	Soybean	nucleus	20.33	14.89
GSMUA_Achr6P24150_001	Banana	nucleus	13.9	14.79
OQU79091	Sorghum	nucleus	12.45	14.53
KRG97481	Soybean	nucleus	19.29	14.22
KRH50366	Soybean	nucleus	18.05	14.22
KRG89293	Soybean	nucleus	18.46	13.95
TraesCS2B01G104800.2	Wheat	nucleus	13.49	13.46
KRH31410	Soybean	nucleus	17.01	13.27
EES03998	Sorghum	nucleus	15.35	13.05
TraesCS3B01G438400.1	Wheat	nucleus	15.15	12.78
Os12t0273700-01	Rice	nucleus	10.58	12.72
Zm00001d023630_P005	Maize	nucleus	12.24	12.66
TraesCS3D01G400000.1	Wheat	nucleus	14.73	12.43
TraesCS3A01G404700.2	Wheat	nucleus	14.52	12.22
TraesCS2D01G087000.1	Wheat	nucleus	12.24	12.22
Os01t0885300-01	Rice	nucleus	14.32	12.04
GSMUA_Achr7P23570_001	Banana	nucleus	12.86	11.61
EES06976	Sorghum	nucleus	12.66	11.57
TraesCS6A01G159300.1	Wheat	nucleus	13.07	11.39
GSMUA_Achr6P18450_001	Banana	nucleus	12.45	11.39
TraesCS6D01G153200.1	Wheat	nucleus	12.86	11.21
Zm00001d016849_P002	Maize	nucleus	12.86	11.13
Zm00001d042598_P003	Maize	mitochondrion	14.73	11.04
TraesCS6B01G192000.1	Wheat	nucleus	12.66	11.03
HORVU6Hr1G033310.33	Barley	cytosol	13.49	10.85
TraesCS2A01G089100.1	Wheat	nucleus	7.05	10.3
Os02t0558600-01	Rice	nucleus	12.66	10.29
HORVU1Hr1G063930.1	Barley	nucleus	14.73	9.73
TraesCS1A01G263200.1	Wheat	nucleus	14.73	9.73
Os05t0420500-01	Rice	nucleus	14.11	9.56
TraesCS1B01G273800.1	Wheat	nucleus	14.32	9.44
TraesCS1D01G263300.1	Wheat	nucleus	14.11	9.3
Zm00001d038217_P002	Maize	nucleus	13.28	8.49
EES18249	Sorghum	nucleus	13.28	8.34
HORVU2Hr1G014550.1	Barley	cytosol	6.22	5.46

Protein Annotations

EMBL:ACUP02005285	EnsemblPlants:KRH45764	EnsemblPlantsGene:GLYMA_08G292700	EntrezGene:100306130	ncoils:Coil	PANTHER:PTHR31358
PANTHER:PTHR31358:SF17	ProteinID:KRH45764	ProteinID:KRH45764.1	SEG:seg	UniParc:UPI0003DEC228	UniProt:A0A0R0J2G1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:40686223..40691800

Molecular Weight (calculated)

53282.4 Da

IEP (calculated)

9.978

GRAVY (calculated)

-0.989

Length

482 amino acids

Sequence
(BLAST)

001: MMGKTAASNP ALQVSVSFGR FENDSLSWEK WSAFSPNKYL EEVEKCATPG SVAQKKAYFE AHYKNIAARK AELLAQAKQM EKDSPRSQRQ NGEDLSCNTC
101: GTDAECDMSS TQGSSEGVKQ ETNSIGEIVR TDVSNLMEDV AVSIDYQGSS VEGEKENEEL ESRLGSSQID KHEEVVCVEQ GGSKEESPNT EAEDVKEISH
201: NVNNEPAKTS ENEAKYVTLD HPKVSKKVTP VNRESNATKA KKKSMLSTSK PKASQFSTPR SSKPTSTPTK TLASASSTKR GISPSISGRK INSTSENRKV
301: PNKSLHMSLS LAPSQPDPAS HTTMRKSLIM EKMGDKDIVK RAFKTFQNNF NQPKTSGENK SLVKEKVPSK VTESRNPTSI TLRKEDGQSP KVDSMDRRSV
401: NAVRTAFGLK GDVKAEKGKE FPRKIDEKFN SKEVERTHLQ LKSKGEKIKH ISKATHLPAF HWGQKASKSH PEKGDVKIEK WR

Best Arabidopsis Sequence Match ( AT1G70100.1 )
(BLAST)

001: MVDMEVGIAS GEDKITTAAS SNQELQVSVS FGKFENDSLS WEKFSSFSPN KYLEEVEKCA TAGSVAQKKA YFESHYKKIA ERRADIIMEQ EKLLERNASF
101: RPNIQNRERT DDSDNDESMM IEFSTGYGSN GESTSEEDKL VTVIVTEVNE TCNHKPLEET MDFKECRSSV DTGDDLSTLK LEEKLEEIVQ VEDKEKVEEV
201: ICMKEEVKED VPSKDTGEMS ETLMKETKKE KDHNPIKKTD KNVRTNHMRA SPKSNQVTKK PVTSKVVSGR KTQPSKEKSM TKATNKAASP VLKPPGFSTP
301: RVSKSASTIS SMSTSRSSVK KESVSTLLRK KQTAPKSLPI SLNVDQSVSD PTAVPTTRKS LIMERMGDKD IVRRAFKSFQ KSFDQMKSTD DGQDTAPKQV
401: LAKATAVQRL GTTGQKNVRL AKSDGTERKG PNSHRSSSVV SKSNGTAEKQ KDVRCFMSKP NHVHLIL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits to 2309 proteins in 344 species: Archae - 6; Bacteria - 672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses - 37; Other Eukaryot /.../83 (source: NCBI BLink). [Source:TAIR;Acc:AT1G70100]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.