Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G087000.1 | Wheat | nucleus | 59.7 | 40.79 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 52.73 | 31.69 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 41.52 | 28.36 |
| Os12t0273700-01 | Rice | nucleus | 21.82 | 17.96 |
| OQU79091 | Sorghum | nucleus | 19.09 | 15.25 |
| Zm00001d023630_P005 | Maize | nucleus | 19.7 | 13.95 |
| KRG99370 | Soybean | nucleus | 7.58 | 10.33 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.64 | 8.81 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.33 | 8.78 |
| PGSC0003DMT400017939 | Potato | nucleus | 13.03 | 8.67 |
| KRH07049 | Soybean | nucleus | 12.73 | 8.42 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 9.39 | 8.4 |
| KRG99221 | Soybean | nucleus | 12.12 | 8.39 |
| Solyc02g067950.2.1 | Tomato | extracellular | 12.12 | 8.06 |
| KRH69438 | Soybean | nucleus | 12.12 | 7.97 |
| KRH16191 | Soybean | nucleus | 8.79 | 7.84 |
| KRH74704 | Soybean | nucleus | 12.73 | 7.73 |
| KRH57609 | Soybean | nucleus | 14.55 | 7.72 |
| Bra036350.1-P | Field mustard | nucleus | 12.42 | 7.36 |
| KRH45764 | Soybean | nucleus | 10.3 | 7.05 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 12.12 | 6.98 |
| CDX99732 | Canola | nucleus | 11.21 | 6.93 |
| KRG94005 | Soybean | nucleus | 13.33 | 6.69 |
| CDY40987 | Canola | nucleus | 11.52 | 6.61 |
| KRG97481 | Soybean | nucleus | 12.73 | 6.42 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.27 | 6.42 |
| AT3G26050.1 | Thale cress | nucleus | 10.0 | 6.19 |
| KRH33693 | Soybean | nucleus | 3.94 | 6.1 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.18 | 6.0 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 10.0 | 5.97 |
| PGSC0003DMT400031254 | Potato | nucleus | 11.52 | 5.89 |
| Solyc05g014270.2.1 | Tomato | nucleus | 11.52 | 5.71 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 6.67 | 5.3 |
| Solyc05g006490.2.1 | Tomato | nucleus | 9.39 | 5.15 |
| KRH31410 | Soybean | nucleus | 9.39 | 5.02 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 10.91 | 4.93 |
| PGSC0003DMT400058225 | Potato | nucleus | 8.79 | 4.87 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G089100.1 | EnsemblPlantsGene:TraesCS2A01G089100 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF27 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2A:+:42319527..42322576
Molecular Weight (calculated)
35833.9 Da
IEP (calculated)
9.489
GRAVY (calculated)
-0.800
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDEPAGEET GGVDSGAPED CGAVVDAAVP GEAHQELKAV ADGVVSSCRL DSTAERSHEL RDVQVAEARK GLQLDAGCVV AAVDAVEKQP LQESLIVNQG
101: VADTVEKKRH PMSSLFQKPA EFSSPPSGKK APSSSAKRRS TLRPAKENSS PFPSTDSNKQ EETSVAQKGS ILGTMNFRRC EIGDTASRSR NLGSTIASRI
201: SQLESASRPV KDVHPKVNKQ RRTSKGFCKG IPEAASTATQ QPEQRSPYVS VTRVKEMLFG STSPPTRPET NIAKENMGKA NDEPELKEIH QSVRFKARSL
301: PNFYWRSKES KDSRQGHERP TKIRRTAIID
101: VADTVEKKRH PMSSLFQKPA EFSSPPSGKK APSSSAKRRS TLRPAKENSS PFPSTDSNKQ EETSVAQKGS ILGTMNFRRC EIGDTASRSR NLGSTIASRI
201: SQLESASRPV KDVHPKVNKQ RRTSKGFCKG IPEAASTATQ QPEQRSPYVS VTRVKEMLFG STSPPTRPET NIAKENMGKA NDEPELKEIH QSVRFKARSL
301: PNFYWRSKES KDSRQGHERP TKIRRTAIID
001: MSSGMGREVV EVLMDRNADV SSARVHVAPK IAAEETDEEF EVKECTEEKS LSENAPNVGS AERVGAQKSP KTRNGNAKVS KQQDAPLLAV RKPLQPENKK
101: HIDDEDNCSI ASSVATSMRM GKSGLTYGSA PTFRSAQRAE KRKEYYQKLE EKNQALEAER NELEQRQKDE QEAALKQLRK NLKFKAKPVP NFYYEAPPAK
201: PELKKLPLTR PKSPKLILSR RKSFSDAVSS SSREEILKTV SNRNRHSTGT VQNKDDDHRN KNTNAAHDSP RVRSGKGKSG LKPVNESSEE A
101: HIDDEDNCSI ASSVATSMRM GKSGLTYGSA PTFRSAQRAE KRKEYYQKLE EKNQALEAER NELEQRQKDE QEAALKQLRK NLKFKAKPVP NFYYEAPPAK
201: PELKKLPLTR PKSPKLILSR RKSFSDAVSS SSREEILKTV SNRNRHSTGT VQNKDDDHRN KNTNAAHDSP RVRSGKGKSG LKPVNESSEE A
Arabidopsis Description
WDL1WVD2-like 1 [Source:TAIR;Acc:AT3G04630]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.