Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032926 | Potato | nucleus | 82.44 | 80.82 |
| Solyc02g067950.2.1 | Tomato | extracellular | 51.7 | 52.22 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 37.52 | 33.16 |
| AT3G01710.3 | Thale cress | nucleus | 26.75 | 32.68 |
| KRH07049 | Soybean | nucleus | 30.34 | 30.46 |
| Zm00001d024922_P001 | Maize | nucleus | 6.19 | 30.39 |
| CDX91933 | Canola | nucleus | 19.36 | 29.94 |
| Bra000994.1-P | Field mustard | nucleus | 20.96 | 29.75 |
| Bra015186.1-P | Field mustard | nucleus | 17.96 | 29.41 |
| CDY33408 | Canola | nucleus | 21.16 | 28.49 |
| CDX74313 | Canola | nucleus | 22.55 | 28.25 |
| CDY32377 | Canola | nucleus | 16.57 | 28.14 |
| KRH57609 | Soybean | nucleus | 32.73 | 26.37 |
| KRG94005 | Soybean | nucleus | 29.74 | 22.64 |
| HORVU2Hr1G014490.1 | Barley | plastid | 6.99 | 19.13 |
| Solyc05g014270.2.1 | Tomato | nucleus | 22.75 | 17.12 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 15.57 | 16.15 |
| Os12t0273700-01 | Rice | nucleus | 12.77 | 15.96 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 14.97 | 15.53 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 6.19 | 14.98 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 15.57 | 14.1 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 15.57 | 14.1 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 15.37 | 13.92 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 12.57 | 13.91 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 14.77 | 13.86 |
| EES06976 | Sorghum | nucleus | 14.57 | 13.85 |
| Os01t0885300-01 | Rice | nucleus | 15.57 | 13.61 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 8.78 | 13.33 |
| Solyc05g006490.2.1 | Tomato | nucleus | 15.97 | 13.29 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 14.97 | 13.13 |
| EES03998 | Sorghum | nucleus | 14.77 | 13.05 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 10.78 | 13.01 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 14.77 | 12.91 |
| Zm00001d023630_P005 | Maize | nucleus | 11.98 | 12.88 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 14.57 | 12.78 |
| OQU79091 | Sorghum | nucleus | 10.38 | 12.59 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 13.17 | 12.52 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 14.77 | 12.35 |
| Zm00001d016849_P002 | Maize | nucleus | 13.57 | 12.21 |
| Solyc05g008090.2.1 | Tomato | nucleus | 16.57 | 12.12 |
| Zm00001d042598_P003 | Maize | mitochondrion | 14.37 | 11.2 |
| Os02t0558600-01 | Rice | nucleus | 13.17 | 11.13 |
| Os05t0420500-01 | Rice | nucleus | 15.57 | 10.97 |
| Zm00001d038217_P002 | Maize | nucleus | 16.17 | 10.74 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.98 | 10.7 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 15.57 | 10.68 |
| EES18249 | Sorghum | nucleus | 16.17 | 10.56 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 15.37 | 10.55 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 15.37 | 10.53 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 15.37 | 10.53 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 6.99 | 6.38 |
Protein Annotations
| EnsemblPlants:Solyc02g093720.2.1 | EnsemblPlantsGene:Solyc02g093720.2 | InterPro:TPX2_C | ncoils:Coil | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 |
| PFAM:PF06886 | SEG:seg | UniParc:UPI00027686F7 | UniProt:K4BDG8 | MapMan:20.1.5.2 | : |
Description
No Description!
Coordinates
chr2:-:54463634..54467420
Molecular Weight (calculated)
55297.0 Da
IEP (calculated)
9.976
GRAVY (calculated)
-0.852
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSACLIHA FSYASAIPNE IKQGNPVHAL GESISFGRFV SESLDWEKWS TFSHKRYVEE AERYAKPGSV AQKKAFFEAH YKKIAAQKAA ALLEQANQQN
101: PDSEITKNSA PDSTSLVKPH VEANQEEVHE NPDALTTDSM VKASVSVADV EEIESESPVE GPGTPEATEK EPSNHIENGE TQETVSEISE TSHTEKPLLK
201: TKSSSSKLED DAASVTSKKK SAFSSFKSAV YSKKSKFPFP PTRHSIPLDV DKENNFTPIT TNTNLDLMNE MRSTPKSLSK LINFTPAKEP HKIPPPPPFL
301: KKESSKVAPA TSKASKHCAT PLKTPMATSN GASNHPMTTP SSESRRIKTP IHPTASGSIT AGPKWNILSS VSKSFTAYRN KLQSPTLSTP FSLRTEERAA
401: RRKQKLEEKF NAKEEKKVQQ QTTLKEKAGT ELRKLGQSFC FKARPLPDFY KETETAKDHA KKIPVTQAPL PKRGRMPYPS SKQGLVSMKN DSCKNPRKKT
501: S
101: PDSEITKNSA PDSTSLVKPH VEANQEEVHE NPDALTTDSM VKASVSVADV EEIESESPVE GPGTPEATEK EPSNHIENGE TQETVSEISE TSHTEKPLLK
201: TKSSSSKLED DAASVTSKKK SAFSSFKSAV YSKKSKFPFP PTRHSIPLDV DKENNFTPIT TNTNLDLMNE MRSTPKSLSK LINFTPAKEP HKIPPPPPFL
301: KKESSKVAPA TSKASKHCAT PLKTPMATSN GASNHPMTTP SSESRRIKTP IHPTASGSIT AGPKWNILSS VSKSFTAYRN KLQSPTLSTP FSLRTEERAA
401: RRKQKLEEKF NAKEEKKVQQ QTTLKEKAGT ELRKLGQSFC FKARPLPDFY KETETAKDHA KKIPVTQAPL PKRGRMPYPS SKQGLVSMKN DSCKNPRKKT
501: S
001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE
Arabidopsis Description
Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.