Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G263300.1 | Wheat | nucleus | 93.57 | 93.57 |
TraesCS1A01G263200.1 | Wheat | nucleus | 93.3 | 93.42 |
HORVU1Hr1G063930.1 | Barley | nucleus | 90.56 | 90.68 |
Os05t0420500-01 | Rice | nucleus | 42.95 | 44.16 |
EES18249 | Sorghum | nucleus | 38.85 | 37.03 |
Zm00001d038217_P002 | Maize | nucleus | 37.35 | 36.21 |
TraesCS3B01G438400.1 | Wheat | nucleus | 27.77 | 35.55 |
GSMUA_Achr7P23570_001 | Banana | nucleus | 16.55 | 22.66 |
GSMUA_Achr6P18450_001 | Banana | nucleus | 15.73 | 21.82 |
KRH33693 | Soybean | nucleus | 6.02 | 20.66 |
KRH16191 | Soybean | nucleus | 8.07 | 15.95 |
TraesCS6B01G192000.1 | Wheat | nucleus | 12.04 | 15.91 |
VIT_18s0001g05830.t01 | Wine grape | nucleus | 11.35 | 15.9 |
Solyc02g093720.2.1 | Tomato | nucleus | 10.53 | 15.37 |
PGSC0003DMT400017939 | Potato | nucleus | 10.4 | 15.32 |
PGSC0003DMT400032926 | Potato | nucleus | 10.67 | 15.26 |
Solyc02g067950.2.1 | Tomato | extracellular | 10.26 | 15.12 |
KRG99370 | Soybean | nucleus | 4.92 | 14.88 |
KRH45764 | Soybean | nucleus | 9.44 | 14.32 |
KRH57609 | Soybean | nucleus | 12.18 | 14.31 |
KRH07049 | Soybean | nucleus | 9.58 | 14.03 |
KRG99221 | Soybean | nucleus | 8.89 | 13.63 |
PGSC0003DMT400004849 | Potato | nucleus | 7.93 | 12.89 |
PGSC0003DMT400031254 | Potato | nucleus | 11.08 | 12.56 |
KRH69438 | Soybean | nucleus | 8.62 | 12.55 |
KRH74704 | Soybean | nucleus | 9.3 | 12.52 |
KRG97481 | Soybean | nucleus | 10.81 | 12.08 |
TraesCS2B01G104800.2 | Wheat | nucleus | 7.93 | 12.01 |
KRG94005 | Soybean | nucleus | 10.81 | 12.01 |
KRH31410 | Soybean | nucleus | 9.85 | 11.65 |
PGSC0003DMT400058225 | Potato | nucleus | 9.44 | 11.58 |
Solyc05g006490.2.1 | Tomato | nucleus | 9.3 | 11.3 |
Solyc05g014270.2.1 | Tomato | nucleus | 9.71 | 10.66 |
Solyc04g005060.2.1 | Tomato | nucleus | 4.38 | 8.56 |
Protein Annotations
EnsemblPlants:TraesCS1B01G273800.1 | EnsemblPlantsGene:TraesCS1B01G273800 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF7 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1B:+:480836524..480845469
Molecular Weight (calculated)
79402.8 Da
IEP (calculated)
10.932
GRAVY (calculated)
-0.881
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQNCF GWPHEESSGQ DSSQGTTQVF DHGSISFGRF DLESLAWEKW SVFTNDRRTE EFVKFNGLVA KKKAYFEEYF KRIRELKALE QQNQQTELNL
101: EYSGDGSDSS QTGEDEPVAK HASPAGSGTH VDDSMGQIEA ETTPEHRLGC YKDHNESISN GISTMTRSSS VGGLQIIGEE TGENASSDKQ NAKCGQDDLV
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTKSYNPDH TFVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERPVTRDGS QNPAGMASSC RPSTAERRLA TRDLAANQTN IASPCRPSTA ERRAITKELA PKHANVATPR RPSTADRRPI TKEPAPNNAS
401: IATPHRPSTP DRRLTTKEPA PKHANIATPQ RPSTAERRPT RREMAPKLAG IASPCWPSSA ERRPVARGIA EKNADVVTLR RPSTAERRPI KREPAPKHAD
501: VVPLRRPSTA ERRPVARDTG LKHANVGNPC CPSTPEPCLS RGSAAKHADV VITSCRPSTG ERRAVAKENA LKLDPKTPIR LRAMPGNSNG AMATAATPQK
601: AITRNLVKTS KPEMKSYAKG RLELQVGGKL KSSSVNLPPR KVLTSNVGAN RVVENIRKPI KQGIQETVGS RVFASKNATP LQTGSTKTRV PNPPPPPPPR
701: RASQSPSKPS PSPNKLSVGG RKPKASTPHW H
101: EYSGDGSDSS QTGEDEPVAK HASPAGSGTH VDDSMGQIEA ETTPEHRLGC YKDHNESISN GISTMTRSSS VGGLQIIGEE TGENASSDKQ NAKCGQDDLV
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTKSYNPDH TFVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERPVTRDGS QNPAGMASSC RPSTAERRLA TRDLAANQTN IASPCRPSTA ERRAITKELA PKHANVATPR RPSTADRRPI TKEPAPNNAS
401: IATPHRPSTP DRRLTTKEPA PKHANIATPQ RPSTAERRPT RREMAPKLAG IASPCWPSSA ERRPVARGIA EKNADVVTLR RPSTAERRPI KREPAPKHAD
501: VVPLRRPSTA ERRPVARDTG LKHANVGNPC CPSTPEPCLS RGSAAKHADV VITSCRPSTG ERRAVAKENA LKLDPKTPIR LRAMPGNSNG AMATAATPQK
601: AITRNLVKTS KPEMKSYAKG RLELQVGGKL KSSSVNLPPR KVLTSNVGAN RVVENIRKPI KQGIQETVGS RVFASKNATP LQTGSTKTRV PNPPPPPPPR
701: RASQSPSKPS PSPNKLSVGG RKPKASTPHW H
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.