Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18249 | Sorghum | nucleus | 65.12 | 64.02 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 38.73 | 40.0 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 38.73 | 39.95 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 37.8 | 39.04 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 36.21 | 37.35 |
| Os05t0420500-01 | Rice | nucleus | 33.42 | 35.44 |
| Zm00001d024922_P001 | Maize | nucleus | 4.38 | 32.35 |
| Zm00001d042598_P003 | Maize | mitochondrion | 25.2 | 29.55 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 14.99 | 21.16 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 14.59 | 20.87 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 5.31 | 19.32 |
| KRH33693 | Soybean | nucleus | 5.04 | 17.84 |
| KRG99370 | Soybean | nucleus | 5.44 | 16.94 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.74 | 16.17 |
| Solyc02g067950.2.1 | Tomato | extracellular | 10.61 | 16.13 |
| PGSC0003DMT400017939 | Potato | nucleus | 10.48 | 15.93 |
| PGSC0003DMT400032926 | Potato | nucleus | 10.74 | 15.85 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 10.61 | 15.33 |
| Zm00001d016849_P002 | Maize | nucleus | 11.01 | 14.9 |
| KRH16191 | Soybean | nucleus | 6.9 | 14.05 |
| KRH07049 | Soybean | nucleus | 9.15 | 13.83 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.22 | 13.78 |
| KRH45764 | Soybean | nucleus | 8.49 | 13.28 |
| KRG99221 | Soybean | nucleus | 8.36 | 13.21 |
| PGSC0003DMT400058225 | Potato | nucleus | 10.08 | 12.75 |
| KRH69438 | Soybean | nucleus | 8.49 | 12.75 |
| KRH57609 | Soybean | nucleus | 10.34 | 12.54 |
| KRH74704 | Soybean | nucleus | 8.75 | 12.15 |
| Solyc05g006490.2.1 | Tomato | nucleus | 9.68 | 12.13 |
| KRG97481 | Soybean | nucleus | 10.48 | 12.08 |
| Zm00001d023630_P005 | Maize | nucleus | 7.43 | 12.02 |
| Solyc05g014270.2.1 | Tomato | nucleus | 10.34 | 11.71 |
| KRG94005 | Soybean | nucleus | 10.21 | 11.7 |
| PGSC0003DMT400031254 | Potato | nucleus | 9.68 | 11.32 |
| KRH31410 | Soybean | nucleus | 9.02 | 11.0 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.24 | 8.56 |
Protein Annotations
| EnsemblPlants:Zm00001d038217_P002 | EnsemblPlants:Zm00001d038217_T002 | EnsemblPlantsGene:Zm00001d038217 | EntrezGene:100278833 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF7 |
| ProteinID:AQK86063.1 | SEG:seg | UniParc:UPI0008443430 | UniProt:A0A1D6M4K4 | MapMan:35.2 | : |
Description
TPX2 (targeting protein for Xklp2) protein family
Coordinates
chr6:+:151823509..151834751
Molecular Weight (calculated)
83277.5 Da
IEP (calculated)
10.522
GRAVY (calculated)
-0.737
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEVNQNFF AWSQEETSVQ DLSQGTSQMF GHGSISFGRF DLESLEWEKW SVFTNDRRHE EFGKFNGLVA KKKAYFEEYF KRIRELKALQ QQDQQTELHL
101: EYCGDGSDSS QTGEYEPAAA HGAPTESETL VEDSTKQTAA ATTFEHGTEC YGYHENGSLV NEISAPTHFS PVGDLQHIGK QMKGSVSGKM DILKQDANSS
201: QDVPMIHEIM ITPNKRAIEK DSRVGQASKT ISKTVKVTSS NVSDHTYVSK GPCSGEPSVI NQMAKPENIL SLRRPREATS DLVGTTARSG ITGVRRPSAA
301: LQRPSTKERR PVTKDASRKH AEVTTPCRPS TSERRTVTGE SALKPENNAI PCRPVTAHRR PITKESATRQ CSIATPRRPS TADRRPATKD LTPKLSNIAA
401: PHRPSTAHRR PISKESAPKH FNVASPHRPS TVERHTSGRD MTSKYVGIAT SYLPSAVKQR PITGEGAHKH ADVVTLSCST ADRRPIRDVA PKYATLALPR
501: RPSTAERHPI ARDIAPKNGL SLRPSTAERR TIARNVEPKH APAQRPSTAE RRPVTRETVL KQANVANSCL PLTPDRRLTK KGDISTLECP STGGRCPITS
601: GTALWSRTMP YYSKGALVTE VTPQKTITPR VVRNSKLENL SYAKERVELQ VDRKQKSSLF NLSSKKTLTS NVRDDQGLEM FKKPNKEVRS FFPFVLLGGV
701: RAHAYKSNNA TTSWTGNVKT KAPVGLSSTL ALTPLSRILQ HNSEAVKVKA MRLT
101: EYCGDGSDSS QTGEYEPAAA HGAPTESETL VEDSTKQTAA ATTFEHGTEC YGYHENGSLV NEISAPTHFS PVGDLQHIGK QMKGSVSGKM DILKQDANSS
201: QDVPMIHEIM ITPNKRAIEK DSRVGQASKT ISKTVKVTSS NVSDHTYVSK GPCSGEPSVI NQMAKPENIL SLRRPREATS DLVGTTARSG ITGVRRPSAA
301: LQRPSTKERR PVTKDASRKH AEVTTPCRPS TSERRTVTGE SALKPENNAI PCRPVTAHRR PITKESATRQ CSIATPRRPS TADRRPATKD LTPKLSNIAA
401: PHRPSTAHRR PISKESAPKH FNVASPHRPS TVERHTSGRD MTSKYVGIAT SYLPSAVKQR PITGEGAHKH ADVVTLSCST ADRRPIRDVA PKYATLALPR
501: RPSTAERHPI ARDIAPKNGL SLRPSTAERR TIARNVEPKH APAQRPSTAE RRPVTRETVL KQANVANSCL PLTPDRRLTK KGDISTLECP STGGRCPITS
601: GTALWSRTMP YYSKGALVTE VTPQKTITPR VVRNSKLENL SYAKERVELQ VDRKQKSSLF NLSSKKTLTS NVRDDQGLEM FKKPNKEVRS FFPFVLLGGV
701: RAHAYKSNNA TTSWTGNVKT KAPVGLSSTL ALTPLSRILQ HNSEAVKVKA MRLT
001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV
301: LFESLLSVLL CNERTTPVS
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV
301: LFESLLSVLL CNERTTPVS
Arabidopsis Description
Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.