Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038217_P002 | Maize | nucleus | 64.02 | 65.12 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 39.37 | 41.37 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 39.37 | 41.31 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 38.33 | 40.27 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 37.03 | 38.85 |
| Os05t0420500-01 | Rice | nucleus | 35.2 | 37.97 |
| EES03998 | Sorghum | nucleus | 25.55 | 34.57 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 15.12 | 21.72 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 13.56 | 19.73 |
| KRH33693 | Soybean | nucleus | 4.69 | 16.9 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.56 | 16.17 |
| EES06976 | Sorghum | nucleus | 10.95 | 15.94 |
| Solyc02g067950.2.1 | Tomato | extracellular | 10.3 | 15.93 |
| PGSC0003DMT400032926 | Potato | nucleus | 10.56 | 15.85 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 10.56 | 15.52 |
| KRG99370 | Soybean | nucleus | 4.82 | 15.29 |
| PGSC0003DMT400017939 | Potato | nucleus | 9.78 | 15.12 |
| KRH07049 | Soybean | nucleus | 9.78 | 15.03 |
| KRG99221 | Soybean | nucleus | 9.13 | 14.68 |
| KRH16191 | Soybean | nucleus | 6.91 | 14.32 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.34 | 14.22 |
| OQU79091 | Sorghum | nucleus | 7.56 | 14.04 |
| KRH57609 | Soybean | nucleus | 11.21 | 13.83 |
| KRH69438 | Soybean | nucleus | 8.87 | 13.55 |
| KRH45764 | Soybean | nucleus | 8.34 | 13.28 |
| KRH74704 | Soybean | nucleus | 9.13 | 12.89 |
| KRG97481 | Soybean | nucleus | 10.95 | 12.84 |
| KRG94005 | Soybean | nucleus | 10.43 | 12.16 |
| KRH31410 | Soybean | nucleus | 9.52 | 11.81 |
| Solyc05g014270.2.1 | Tomato | nucleus | 10.04 | 11.56 |
| Solyc05g006490.2.1 | Tomato | nucleus | 8.87 | 11.3 |
| PGSC0003DMT400058225 | Potato | nucleus | 8.74 | 11.24 |
| PGSC0003DMT400031254 | Potato | nucleus | 9.0 | 10.7 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.69 | 9.63 |
Protein Annotations
| EnsemblPlants:EES18249 | EnsemblPlantsGene:SORBI_3009G141700 | EntrezGene:8058468 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF7 | ProteinID:EES18249 |
| ProteinID:EES18249.1 | RefSeq:XP_002439819.1 | SEG:seg | unigene:Sbi.18833 | unigene:Sbi.20128 | UniParc:UPI0001A88783 |
| UniProt:C5YY63 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:49897684..49904150
Molecular Weight (calculated)
84594.6 Da
IEP (calculated)
10.733
GRAVY (calculated)
-0.904
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQNFF AWSQEETSMQ DLSQGTSQMF GHGSISFGRF DLESLEWEKW SVFTNDRRHE EFGKFNGLVA KKKAYFEEYF KRIRELKALQ QQNQQTELHL
101: EYCGDGSDSS QTGEYEPATA HGAPTESETL VDDSTKQTAA ATTFEHRMEC YGYHENQSLV NEISASTHSS PVGDLQQIGK QMRGSVSGKM DILKQDADSS
201: QHEPMVHEIM TTPNKRTIEK DSRVGQASKI TPKTVKMTSS NVSNCTNVSK GPCSGEPSVI NQMAKPENIL SLRRPREPTS DSVGTAAKSG ITGSRRPSSA
301: ALQRPSTRER RPVTKDASRK HAEVTTPCRP STSEKRTASE SALKHDNNAV PCRPSTAHRR PIAKESATKQ CNIATPRRPS TADRRPVTKD STPKLSNIAA
401: PHRPSTSHRR PISKESAPKH FNIASPQRPS TGQRHTSARD MALTHVGIAT SLPSVVKQRP ITGEGAHKHA DVVTLSCSST ADKRPIVTDF APKHATLALP
501: RRPTTAERRP IARDVAPKND LSHRPSTAER RPIARNVERK HAPAQRPSTA ERRPVTRESV LKQANVAKSR LPLTPDRCLT KKGVISTPER PSTGGRCPIT
601: NGTTVWSRAM PNYSKGAMVT EVTPQKAITP RVVRSSKLEN LSYANEMVEP QVDRKPKSSP FNLPSRKTLT SNVRDDQGLE KFKKPNKEVR SFFSFRAAGA
701: LHEGVRGHAY KSNNVTPSQT GNVKTKAPVP PPPPLTPGRP YCTEKKPNVN NSPVGGRKPK VSAPRWH
101: EYCGDGSDSS QTGEYEPATA HGAPTESETL VDDSTKQTAA ATTFEHRMEC YGYHENQSLV NEISASTHSS PVGDLQQIGK QMRGSVSGKM DILKQDADSS
201: QHEPMVHEIM TTPNKRTIEK DSRVGQASKI TPKTVKMTSS NVSNCTNVSK GPCSGEPSVI NQMAKPENIL SLRRPREPTS DSVGTAAKSG ITGSRRPSSA
301: ALQRPSTRER RPVTKDASRK HAEVTTPCRP STSEKRTASE SALKHDNNAV PCRPSTAHRR PIAKESATKQ CNIATPRRPS TADRRPVTKD STPKLSNIAA
401: PHRPSTSHRR PISKESAPKH FNIASPQRPS TGQRHTSARD MALTHVGIAT SLPSVVKQRP ITGEGAHKHA DVVTLSCSST ADKRPIVTDF APKHATLALP
501: RRPTTAERRP IARDVAPKND LSHRPSTAER RPIARNVERK HAPAQRPSTA ERRPVTRESV LKQANVAKSR LPLTPDRCLT KKGVISTPER PSTGGRCPIT
601: NGTTVWSRAM PNYSKGAMVT EVTPQKAITP RVVRSSKLEN LSYANEMVEP QVDRKPKSSP FNLPSRKTLT SNVRDDQGLE KFKKPNKEVR SFFSFRAAGA
701: LHEGVRGHAY KSNNVTPSQT GNVKTKAPVP PPPPLTPGRP YCTEKKPNVN NSPVGGRKPK VSAPRWH
001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV
301: LFESLLSVLL CNERTTPVS
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV
301: LFESLLSVLL CNERTTPVS
Arabidopsis Description
Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.