Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P23570_001 | Banana | nucleus | 37.0 | 36.52 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 18.98 | 22.08 |
| EES03998 | Sorghum | nucleus | 20.87 | 19.4 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 21.06 | 19.37 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 20.87 | 19.26 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 20.68 | 19.09 |
| Os01t0885300-01 | Rice | nucleus | 20.49 | 18.85 |
| KRH33693 | Soybean | nucleus | 7.02 | 17.37 |
| KRG99370 | Soybean | nucleus | 7.97 | 17.36 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 15.75 | 15.9 |
| Zm00001d042598_P003 | Maize | mitochondrion | 19.35 | 15.86 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 21.82 | 15.73 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 21.44 | 15.46 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 21.25 | 15.34 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 21.06 | 15.21 |
| Os05t0420500-01 | Rice | nucleus | 20.3 | 15.05 |
| KRH16191 | Soybean | nucleus | 10.25 | 14.59 |
| Zm00001d038217_P002 | Maize | nucleus | 20.87 | 14.59 |
| PGSC0003DMT400032926 | Potato | nucleus | 14.04 | 14.48 |
| KRH69438 | Soybean | nucleus | 13.09 | 13.74 |
| EES18249 | Sorghum | nucleus | 19.73 | 13.56 |
| Solyc02g093720.2.1 | Tomato | nucleus | 12.52 | 13.17 |
| KRH07049 | Soybean | nucleus | 12.14 | 12.83 |
| KRG99221 | Soybean | nucleus | 11.39 | 12.58 |
| KRH45764 | Soybean | nucleus | 11.39 | 12.45 |
| Solyc02g067950.2.1 | Tomato | extracellular | 11.57 | 12.3 |
| PGSC0003DMT400017939 | Potato | nucleus | 11.57 | 12.3 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.85 | 12.25 |
| PGSC0003DMT400004849 | Potato | nucleus | 9.68 | 11.33 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 8.92 | 11.33 |
| PGSC0003DMT400031254 | Potato | nucleus | 13.85 | 11.32 |
| Solyc05g014270.2.1 | Tomato | nucleus | 14.23 | 11.26 |
| KRH74704 | Soybean | nucleus | 11.57 | 11.23 |
| KRH31410 | Soybean | nucleus | 13.09 | 11.16 |
| KRG94005 | Soybean | nucleus | 13.85 | 11.09 |
| Solyc05g006490.2.1 | Tomato | nucleus | 12.14 | 10.63 |
| KRH57609 | Soybean | nucleus | 12.52 | 10.61 |
| KRG97481 | Soybean | nucleus | 12.71 | 10.24 |
| Solyc04g005060.2.1 | Tomato | nucleus | 5.12 | 7.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P18450_001 | EnsemblPlants:GSMUA_Achr6T18450_001 | EnsemblPlantsGene:GSMUA_Achr6G18450_001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | UniParc:UPI0002968055 |
| UniProt:M0T843 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G18450_001]
Coordinates
chr6:+:12700291..12708300
Molecular Weight (calculated)
57790.5 Da
IEP (calculated)
9.848
GRAVY (calculated)
-0.896
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDVDQAYR DWSREELPEG DESHEPSVSQ MLEHGSISFG RFPIESLSWE RKSVFVHNRC QEELEKFNGL VAKKKAYFEE RYRRIRAMKA QQNQQTELTL
101: DYSGDGSISS QSGEEDGAAS LDESARDAAA NTGQSSEEVK PGPSFEQEIN WNRPQQGCLD PESIFQNPTS SRGILQETEP DKTSIDTVLV QPLETESSLP
201: LTGDVEIVSN CSSNLDNEET LQKHKNLMSN FESRCVTQET ASGATKTKSR QLQSRKSLDN KSLSNVKDSV AVRHGQNVKG ETKLNVVRPS KVLKNPSQKM
301: ANQTPRKSTA SRIESNARTA MNASKAPLTE ACSNITSPGP FTLVMERRAN SRGSAAKLDP GSLNKSASSL SHAKGGLSVQ NMLRKTSATS EITSRRGAEI
401: KRDLKEVKKK PLAVDSRYAS SKITESHVGP PKSRSVNLPA RNKLTCNGGT EYKIATAKGT NENEGHARMR ESQRVTGKTT GPSTSGMGTK KVLSAREADI
501: SCSSRKPGLD NLSLDGRKTR RAIPPWR
101: DYSGDGSISS QSGEEDGAAS LDESARDAAA NTGQSSEEVK PGPSFEQEIN WNRPQQGCLD PESIFQNPTS SRGILQETEP DKTSIDTVLV QPLETESSLP
201: LTGDVEIVSN CSSNLDNEET LQKHKNLMSN FESRCVTQET ASGATKTKSR QLQSRKSLDN KSLSNVKDSV AVRHGQNVKG ETKLNVVRPS KVLKNPSQKM
301: ANQTPRKSTA SRIESNARTA MNASKAPLTE ACSNITSPGP FTLVMERRAN SRGSAAKLDP GSLNKSASSL SHAKGGLSVQ NMLRKTSATS EITSRRGAEI
401: KRDLKEVKKK PLAVDSRYAS SKITESHVGP PKSRSVNLPA RNKLTCNGGT EYKIATAKGT NENEGHARMR ESQRVTGKTT GPSTSGMGTK KVLSAREADI
501: SCSSRKPGLD NLSLDGRKTR RAIPPWR
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.