CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94005	Soybean	nucleus	68.01	64.29
KRH25750	Soybean	cytosol	6.11	37.25
VIT_14s0219g00090.t01	Wine grape	nucleus	31.35	34.39
PGSC0003DMT400032926	Potato	nucleus	28.14	34.25
KRH07049	Soybean	nucleus	27.33	34.07
Solyc02g067950.2.1	Tomato	extracellular	26.37	33.06
Solyc02g093720.2.1	Tomato	nucleus	26.37	32.73
CDX91933	Canola	nucleus	16.56	31.79
AT3G01710.3	Thale cress	nucleus	20.74	31.46
CDY33408	Canola	nucleus	18.65	31.18
PGSC0003DMT400017939	Potato	nucleus	24.6	30.85
Zm00001d024922_P001	Maize	nucleus	4.98	30.39
Bra000994.1-P	Field mustard	nucleus	17.2	30.31
Bra015186.1-P	Field mustard	nucleus	14.79	30.07
CDX74313	Canola	nucleus	18.81	29.25
CDY32377	Canola	nucleus	12.7	26.78
KRH74704	Soybean	nucleus	18.17	20.81
KRH33693	Soybean	nucleus	7.07	20.66
KRG99370	Soybean	nucleus	7.72	19.83
KRH31410	Soybean	nucleus	19.61	19.74
KRH45764	Soybean	nucleus	14.95	19.29
HORVU2Hr1G014490.1	Barley	plastid	5.63	19.13
KRG99221	Soybean	nucleus	14.31	18.66
KRG97481	Soybean	nucleus	18.97	18.04
TraesCS2B01G104800.2	Wheat	nucleus	13.99	18.01
KRH69438	Soybean	nucleus	14.47	17.93
TraesCS2D01G087000.1	Wheat	nucleus	13.83	17.81
KRH16191	Soybean	nucleus	9.97	16.76
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	5.47	16.43
KRG89293	Soybean	nucleus	16.24	15.83
Os12t0273700-01	Rice	nucleus	10.13	15.71
OQU79091	Sorghum	nucleus	10.29	15.5
EES03998	Sorghum	nucleus	13.83	15.17
TraesCS3D01G400000.1	Wheat	nucleus	13.83	15.06
TraesCS3B01G438400.1	Wheat	nucleus	13.5	14.71
KRH50366	Soybean	nucleus	14.47	14.71
GSMUA_Achr6P03270_001	Banana	nucleus	9.81	14.7
TraesCS3A01G404700.2	Wheat	nucleus	13.5	14.66
Zm00001d023630_P005	Maize	nucleus	10.93	14.59
TraesCS2A01G089100.1	Wheat	nucleus	7.72	14.55
TraesCS6D01G153200.1	Wheat	nucleus	12.38	13.92
TraesCS6A01G159300.1	Wheat	nucleus	12.22	13.74
GSMUA_Achr7P23570_001	Banana	nucleus	11.74	13.67
TraesCS6B01G192000.1	Wheat	nucleus	12.06	13.56
Zm00001d016849_P002	Maize	nucleus	11.9	13.29
Os01t0885300-01	Rice	nucleus	12.22	13.26
HORVU6Hr1G033310.33	Barley	cytosol	12.38	12.85
Zm00001d042598_P003	Maize	mitochondrion	13.18	12.75
GSMUA_Achr6P24150_001	Banana	nucleus	9.16	12.58
GSMUA_Achr6P18450_001	Banana	nucleus	10.61	12.52
TraesCS1B01G273800.1	Wheat	nucleus	14.31	12.18
TraesCS1A01G263200.1	Wheat	nucleus	14.15	12.05
HORVU1Hr1G063930.1	Barley	nucleus	14.15	12.05
EES06976	Sorghum	nucleus	10.13	11.95
TraesCS1D01G263300.1	Wheat	nucleus	13.99	11.9
Os02t0558600-01	Rice	nucleus	11.09	11.64
EES18249	Sorghum	nucleus	13.83	11.21
Os05t0420500-01	Rice	nucleus	12.54	10.97
Zm00001d038217_P002	Maize	nucleus	12.54	10.34
HORVU2Hr1G014550.1	Barley	cytosol	6.11	6.92

Protein Annotations

EMBL:ACUP02002867	EnsemblPlants:KRH57609	EnsemblPlantsGene:GLYMA_05G072200	EntrezGene:102659529	InterPro:TPX2_C	ncoils:Coil
PANTHER:PTHR31358	PANTHER:PTHR31358:SF12	PFAM:PF06886	ProteinID:KRH57609	ProteinID:KRH57609.1	SEG:seg
UniParc:UPI0002953B8F	UniProt:K7KNC7	MapMan:20.1.5.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:7979968..7984567

Molecular Weight (calculated)

68583.0 Da

IEP (calculated)

10.393

GRAVY (calculated)

-0.741

Length

622 amino acids

Sequence
(BLAST)

001: MGDSTCLMQQ PFCYASGISN EANENNPIHA LGQSISFGRF MSESLAWEKW SSFSHNRYVE EAERYSRPGS VAQKKAFFEA HYKKLAAQKA AALLEQANNE
101: AQKNATGQED EGVIDNDNDT HNSQISPNSE MVVKEEQDAK VLSVTSEQDA VVRLTVSEHD VSVTPESAKV EGAEAVMEKV AVVGSSMKVE LQNQVEDVDA
201: QMEESEKLSA IVTPPILTPI VKVSKSEQEV LASVGMKKPP VSSFKLSKFN GTSKLTTTPV KSTATISFKR DNIATPISNK PANGTSKFTT APIKSTAAIS
301: FKRDNIATPM SNKLANGTSK FTTTPVQSTA AISFERDNIV TPMRNKPAIL STADKKRSTP RSVNFTPIRE LNRLTASVMR KFESTRAGAG SSKASKDSLT
401: PLRTPTMASK EMQKQSSLTP LTEKKRNKTP LDLSSAPGNH TGGSKWRLLS GENRMRSPLI SSPFSLRTEE RAARRKKKLE EKFNANEAQK VQLHTKLKEK
501: TETEIIRKLR QSFCFKARPL PDFYKERKTS TNETKKDPLT HFETPKDGRK STPSMAADSK TSFPPNRPVL KNSGTKHFQG KSGRTLSHPL TSTSTIIPTH
601: ENTSPNIQNG YHTGRNFKYQ PC

Best Arabidopsis Sequence Match ( AT3G01710.2 )
(BLAST)

001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW EKWSAFSTQN PYVAEAERYS KPGSVAQKKA FFEAHYKKVA AARKAAAEEA LLLQQQIPKP
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKALLQ

Arabidopsis Description

TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.