Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g067950.2.1 | Tomato | extracellular | 72.18 | 72.18 |
| PGSC0003DMT400032926 | Potato | nucleus | 47.98 | 46.58 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 36.9 | 32.28 |
| Bra015186.1-P | Field mustard | nucleus | 19.35 | 31.37 |
| AT3G01710.3 | Thale cress | nucleus | 25.4 | 30.73 |
| Bra000994.1-P | Field mustard | nucleus | 21.57 | 30.31 |
| CDX91933 | Canola | nucleus | 19.15 | 29.32 |
| CDY33408 | Canola | nucleus | 21.98 | 29.3 |
| CDX74313 | Canola | nucleus | 22.98 | 28.5 |
| CDY32377 | Canola | nucleus | 16.33 | 27.46 |
| KRH07049 | Soybean | nucleus | 27.62 | 27.45 |
| Zm00001d024922_P001 | Maize | nucleus | 5.44 | 26.47 |
| KRH57609 | Soybean | nucleus | 30.85 | 24.6 |
| KRG94005 | Soybean | nucleus | 28.43 | 21.43 |
| HORVU2Hr1G014490.1 | Barley | plastid | 7.26 | 19.67 |
| PGSC0003DMT400031254 | Potato | nucleus | 20.97 | 16.12 |
| EES06976 | Sorghum | nucleus | 15.52 | 14.61 |
| Zm00001d023630_P005 | Maize | nucleus | 13.71 | 14.59 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 12.9 | 14.13 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 13.71 | 14.08 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 5.85 | 14.01 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 13.51 | 13.87 |
| OQU79091 | Sorghum | nucleus | 11.49 | 13.8 |
| PGSC0003DMT400004849 | Potato | nucleus | 12.5 | 13.78 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 15.32 | 13.74 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 15.12 | 13.56 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 15.12 | 13.56 |
| Os01t0885300-01 | Rice | nucleus | 15.32 | 13.26 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 8.67 | 13.03 |
| Os12t0273700-01 | Rice | nucleus | 10.48 | 12.97 |
| PGSC0003DMT400058225 | Potato | nucleus | 15.52 | 12.92 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 14.72 | 12.74 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 14.11 | 12.26 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 14.31 | 11.85 |
| EES03998 | Sorghum | nucleus | 13.51 | 11.82 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 13.51 | 11.73 |
| Zm00001d016849_P002 | Maize | nucleus | 13.1 | 11.67 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 12.3 | 11.57 |
| PGSC0003DMT400078339 | Potato | nucleus | 15.73 | 11.44 |
| Os02t0558600-01 | Rice | nucleus | 13.51 | 11.3 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 12.1 | 11.24 |
| Zm00001d042598_P003 | Maize | mitochondrion | 13.91 | 10.73 |
| Zm00001d038217_P002 | Maize | nucleus | 15.93 | 10.48 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 15.32 | 10.4 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 15.32 | 10.4 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 15.12 | 10.27 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 15.12 | 10.27 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 8.27 | 9.88 |
| EES18249 | Sorghum | nucleus | 15.12 | 9.78 |
| Os05t0420500-01 | Rice | nucleus | 13.91 | 9.7 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 5.85 | 5.28 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400017939 | EnsemblPlantsGene:PGSC0003DMG400006967 | EntrezGene:102579666 | InterPro:TPX2_C | ncoils:Coil | PANTHER:PTHR31358 |
| PANTHER:PTHR31358:SF12 | PFAM:PF06886 | PGSC:PGSC0003DMG400006967 | RefSeq:XP_015168797.1 | SEG:seg | UniParc:UPI000296C47F |
| UniProt:M1A9S3 | MapMan:20.1.5.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006967]
Coordinates
chr2:-:26624555..26629191
Molecular Weight (calculated)
54999.0 Da
IEP (calculated)
10.431
GRAVY (calculated)
-0.839
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSACLMHA FSYASALPPN EAKQGNHMHA LGESISFGRF TTESLAWDKW STFPHKRYVE EAERYAQPGS VAQKKAFFEA HYKKIAAQKA AALLEQENTQ
101: QDTLTVDPNV NSSMEGVADV KEKENAAPLA HAASLKQPQE TFSGSELSEI SHTEKPLLKS SSSKQDDDVT SATSKKKSAF SSFKSSVHSI KSKIPPSPAR
201: HNISRLVNKE NNFTPITKNP TSAFTNEKKS TSKSLSRLMN FTPAKETDKV PPPLPPTFKK ESSKIAPNAA KKCITPLKTP VETSDGAAKH PMTTPSSENR
301: RMETPIHPSA SGSQTTGPKW NILSSVCSKS LTACRNKLQS PSLSTPFLLR TEERAARRKQ KLEEKFNAKE VQKVQLQTKI KEKAEMELRK LRQSFCFRAR
401: PLPKFYKERE TARNYTKKTP VKRPQSPKLG RNPSNSTMQD LASHPTSTYS GKNCSYKYSG KKNCPISINS HTLSTVMSHD QNASPNIQHQ FGVIDV
101: QDTLTVDPNV NSSMEGVADV KEKENAAPLA HAASLKQPQE TFSGSELSEI SHTEKPLLKS SSSKQDDDVT SATSKKKSAF SSFKSSVHSI KSKIPPSPAR
201: HNISRLVNKE NNFTPITKNP TSAFTNEKKS TSKSLSRLMN FTPAKETDKV PPPLPPTFKK ESSKIAPNAA KKCITPLKTP VETSDGAAKH PMTTPSSENR
301: RMETPIHPSA SGSQTTGPKW NILSSVCSKS LTACRNKLQS PSLSTPFLLR TEERAARRKQ KLEEKFNAKE VQKVQLQTKI KEKAEMELRK LRQSFCFRAR
401: PLPKFYKERE TARNYTKKTP VKRPQSPKLG RNPSNSTMQD LASHPTSTYS GKNCSYKYSG KKNCPISINS HTLSTVMSHD QNASPNIQHQ FGVIDV
001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE
Arabidopsis Description
Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.