Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0885300-01 | Rice | nucleus | 52.38 | 51.83 |
| Zm00001d042598_P003 | Maize | mitochondrion | 57.32 | 50.54 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 42.5 | 42.21 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 42.33 | 42.03 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 40.39 | 39.97 |
| EES18249 | Sorghum | nucleus | 34.57 | 25.55 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 20.11 | 21.35 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 19.4 | 20.87 |
| KRH33693 | Soybean | nucleus | 7.41 | 19.72 |
| EES06976 | Sorghum | nucleus | 16.23 | 17.46 |
| OQU79091 | Sorghum | nucleus | 11.99 | 16.46 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 14.29 | 15.52 |
| KRH45764 | Soybean | nucleus | 13.05 | 15.35 |
| KRG99370 | Soybean | nucleus | 6.53 | 15.29 |
| Solyc02g067950.2.1 | Tomato | extracellular | 13.23 | 15.12 |
| KRG99221 | Soybean | nucleus | 12.7 | 15.09 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.58 | 15.07 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.05 | 14.77 |
| PGSC0003DMT400004849 | Potato | nucleus | 11.64 | 14.67 |
| KRH16191 | Soybean | nucleus | 9.52 | 14.59 |
| KRH07049 | Soybean | nucleus | 12.17 | 13.83 |
| KRH57609 | Soybean | nucleus | 15.17 | 13.83 |
| KRH74704 | Soybean | nucleus | 13.23 | 13.81 |
| KRH69438 | Soybean | nucleus | 11.99 | 13.55 |
| PGSC0003DMT400017939 | Potato | nucleus | 11.82 | 13.51 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.58 | 12.79 |
| KRG94005 | Soybean | nucleus | 14.46 | 12.46 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.05 | 12.42 |
| KRG97481 | Soybean | nucleus | 13.4 | 11.62 |
| KRH31410 | Soybean | nucleus | 12.52 | 11.49 |
| PGSC0003DMT400031254 | Potato | nucleus | 12.87 | 11.32 |
| Solyc05g014270.2.1 | Tomato | nucleus | 12.7 | 10.81 |
| Solyc04g005060.2.1 | Tomato | nucleus | 6.7 | 10.16 |
Protein Annotations
| EnsemblPlants:EES03998 | EnsemblPlantsGene:SORBI_3003G380500 | EntrezGene:8061479 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | ProteinID:EES03998 |
| ProteinID:EES03998.1 | RefSeq:XP_002458878.1 | SEG:seg | unigene:Sbi.176 | UniParc:UPI0001A853CE | UniProt:C5XEM8 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:69414223..69417619
Molecular Weight (calculated)
61783.0 Da
IEP (calculated)
10.851
GRAVY (calculated)
-1.000
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQTYF SWSQGGSTER DGPQGVSVSQ TLDHGSISFG RFELESLSWE KWSVFTNDRR NEEFGKFNGL VAQKKAYFEE YYKKIRELKA SQQQNQQTEL
101: ILEYSGDGSD SSQTAEDEQG ADLETPTGSG AAVDVYVEEA LHETMSEHGL QCYDDQGNEN FDTEFSSSNL SSSGVLQQTD VRGAVRGSSS TSKMDAGKKN
201: AGSVHGDTRT TYEAARTPRR IIEKDSRLRH SPKIIPKSIK TLSKSAMDYT SERPGSMKPN TSMNQKAKLV QRSSAAAQKM CGPTEGSKHT GLRRPSSAGA
301: RRPSTGDRHA IAKENSQLPA VVSTPRRPST AERRPVTRDR AQKEANVTTP RRPSTSERLP VKRENAAKHN DISAVRRPST GERRAITRDS VVRTDVKTPS
401: KARATVAHPK GETTTVGNTK KAVTPNAARS GKLETKSNNN RLKGPSVLDS HSTRSKRMDL QASGKQKSSS VNLPPRKIFS STAGEPAVET ISRSKKKEGV
501: QATVQSRAST SKRTTPLQTG NLKARAPNPP APPAPPPPRR TSRMISKPTG ASSIVGRKPK ASAPQWH
101: ILEYSGDGSD SSQTAEDEQG ADLETPTGSG AAVDVYVEEA LHETMSEHGL QCYDDQGNEN FDTEFSSSNL SSSGVLQQTD VRGAVRGSSS TSKMDAGKKN
201: AGSVHGDTRT TYEAARTPRR IIEKDSRLRH SPKIIPKSIK TLSKSAMDYT SERPGSMKPN TSMNQKAKLV QRSSAAAQKM CGPTEGSKHT GLRRPSSAGA
301: RRPSTGDRHA IAKENSQLPA VVSTPRRPST AERRPVTRDR AQKEANVTTP RRPSTSERLP VKRENAAKHN DISAVRRPST GERRAITRDS VVRTDVKTPS
401: KARATVAHPK GETTTVGNTK KAVTPNAARS GKLETKSNNN RLKGPSVLDS HSTRSKRMDL QASGKQKSSS VNLPPRKIFS STAGEPAVET ISRSKKKEGV
501: QATVQSRAST SKRTTPLQTG NLKARAPNPP APPAPPPPRR TSRMISKPTG ASSIVGRKPK ASAPQWH
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.