CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69438	Soybean	nucleus	48.25	52.19
KRH45764	Soybean	nucleus	41.62	46.89
KRH25750	Soybean	cytosol	7.92	42.16
KRG99370	Soybean	nucleus	18.6	41.74
KRG99221	Soybean	nucleus	36.28	41.3
CDY46410	Canola	cytosol	11.97	39.88
KRH16191	Soybean	nucleus	24.13	35.41
KRH33693	Soybean	nucleus	13.44	34.27
VIT_01s0026g00960.t01	Wine grape	nucleus	27.81	29.43
AT1G24160.1	Thale cress	nucleus	28.91	29.07
Bra024641.1-P	Field mustard	nucleus	26.15	28.12
Bra016236.1-P	Field mustard	nucleus	24.86	28.01
Bra016318.1-P	Field mustard	nucleus	24.86	27.66
CDY14672	Canola	nucleus	25.23	27.62
AT1G70100.3	Thale cress	nucleus	25.41	27.38
CDY11620	Canola	nucleus	24.68	27.35
CDY16238	Canola	nucleus	25.05	26.88
Zm00001d024922_P001	Maize	nucleus	4.79	25.49
PGSC0003DMT400004849	Potato	nucleus	20.99	25.33
CDY38789	Canola	nucleus	13.81	25.17
KRH57609	Soybean	nucleus	20.81	18.17
KRH07049	Soybean	nucleus	16.39	17.84
GSMUA_Achr6P03270_001	Banana	nucleus	13.44	17.59
HORVU2Hr1G014490.1	Barley	plastid	5.89	17.49
Solyc04g005060.2.1	Tomato	nucleus	11.6	16.84
PGSC0003DMT400058225	Potato	nucleus	18.05	16.44
KRG94005	Soybean	nucleus	19.89	16.41
Solyc05g006490.2.1	Tomato	nucleus	17.31	15.61
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	5.89	15.46
KRH50366	Soybean	nucleus	16.94	15.03
TraesCS2D01G087000.1	Wheat	nucleus	13.08	14.7
TraesCS2B01G104800.2	Wheat	nucleus	13.08	14.7
KRG89293	Soybean	nucleus	17.13	14.58
KRH31410	Soybean	nucleus	16.39	14.4
TraesCS3B01G438400.1	Wheat	nucleus	14.92	14.19
KRG97481	Soybean	nucleus	16.57	13.76
Os01t0885300-01	Rice	nucleus	14.36	13.61
TraesCS3D01G400000.1	Wheat	nucleus	14.18	13.49
EES03998	Sorghum	nucleus	13.81	13.23
EES06976	Sorghum	nucleus	12.71	13.09
OQU79091	Sorghum	nucleus	9.94	13.08
TraesCS3A01G404700.2	Wheat	nucleus	13.63	12.91
Zm00001d023630_P005	Maize	nucleus	11.05	12.88
Zm00001d016849_P002	Maize	nucleus	13.08	12.75
TraesCS2A01G089100.1	Wheat	nucleus	7.73	12.73
Os12t0273700-01	Rice	nucleus	9.39	12.72
GSMUA_Achr6P24150_001	Banana	nucleus	10.13	12.14
GSMUA_Achr6P18450_001	Banana	nucleus	11.23	11.57
Zm00001d042598_P003	Maize	mitochondrion	13.26	11.2
GSMUA_Achr7P23570_001	Banana	nucleus	10.87	11.05
TraesCS6D01G153200.1	Wheat	nucleus	11.23	11.03
TraesCS6A01G159300.1	Wheat	nucleus	10.68	10.49
TraesCS6B01G192000.1	Wheat	nucleus	10.5	10.31
HORVU6Hr1G033310.33	Barley	cytosol	11.23	10.18
Os02t0558600-01	Rice	nucleus	11.05	10.12
TraesCS1B01G273800.1	Wheat	nucleus	12.52	9.3
TraesCS1A01G263200.1	Wheat	nucleus	12.34	9.18
HORVU1Hr1G063930.1	Barley	nucleus	12.34	9.18
EES18249	Sorghum	nucleus	12.89	9.13
TraesCS1D01G263300.1	Wheat	nucleus	12.15	9.03
Os05t0420500-01	Rice	nucleus	11.79	9.0
Zm00001d038217_P002	Maize	nucleus	12.15	8.75
HORVU2Hr1G014550.1	Barley	cytosol	5.52	5.46

Protein Annotations

EMBL:ACUP02000063	EnsemblPlants:KRH74704	EnsemblPlantsGene:GLYMA_01G037700	EntrezGene:100810690	PANTHER:PTHR31358	PANTHER:PTHR31358:SF17
ProteinID:KRH74703.1	ProteinID:KRH74704	ProteinID:KRH74704.1	SEG:seg	UniParc:UPI0006ED50BC	UniProt:A0A0R0LFN3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4005744..4011110

Molecular Weight (calculated)

60281.7 Da

IEP (calculated)

10.260

GRAVY (calculated)

-1.014

Length

543 amino acids

Sequence
(BLAST)

001: MGEFLVDATV FEDKKMGEGA AASNPALQVS VSFGRFENDS LSWERWSSFS PNKYLEEVEK CATPGSVAQK KAYFEAHYKK VAARKAELLA QEKQREKDSF
101: GSEEHSGIDL SGNTDAEHDI SNNTQGSSEG VEHETSSAGE IHKTHVNESE EEFAVSRDYQ SSSVQVENKE LESRSHSSYQ IDEPENVCKK QVESPNNNIE
201: AEDVKEISHV VYKETGKASE GEVKDVKLNH PKESKVKSVS KGSNAARTKK KSMLPTSKAS PISTPKSSKP ASTTPTKTVT PASSTRKGSS PSLTRRQITS
301: SGESRKFANK PLHMSLSLAP SNPDPAPQST MRRSLIMENM GDKDIVKRAF KTFQNSFNQP KTSVEDKSLI KKQVPSRGTV SKVPTSTTLR KENGRPTKVE
401: NLYQSGNAVR TTLGPKRDIR AEKGKESSRK IEEKSNTKGV ERTRLQSKVK EEKEAEMKRL KHNVKGTSSP AFNRGQKVVK SRPEKVLKIK RAEGEKRLIH
501: QCVRPCISKS STHPSLHKRA KMQDIVTLGN MIEEFSESRN KTN

Best Arabidopsis Sequence Match ( AT1G70100.1 )
(BLAST)

001: MVDMEVGIAS GEDKITTAAS SNQELQVSVS FGKFENDSLS WEKFSSFSPN KYLEEVEKCA TAGSVAQKKA YFESHYKKIA ERRADIIMEQ EKLLERNASF
101: RPNIQNRERT DDSDNDESMM IEFSTGYGSN GESTSEEDKL VTVIVTEVNE TCNHKPLEET MDFKECRSSV DTGDDLSTLK LEEKLEEIVQ VEDKEKVEEV
201: ICMKEEVKED VPSKDTGEMS ETLMKETKKE KDHNPIKKTD KNVRTNHMRA SPKSNQVTKK PVTSKVVSGR KTQPSKEKSM TKATNKAASP VLKPPGFSTP
301: RVSKSASTIS SMSTSRSSVK KESVSTLLRK KQTAPKSLPI SLNVDQSVSD PTAVPTTRKS LIMERMGDKD IVRRAFKSFQ KSFDQMKSTD DGQDTAPKQV
401: LAKATAVQRL GTTGQKNVRL AKSDGTERKG PNSHRSSSVV SKSNGTAEKQ KDVRCFMSKP NHVHLIL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits to 2309 proteins in 344 species: Archae - 6; Bacteria - 672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses - 37; Other Eukaryot /.../83 (source: NCBI BLink). [Source:TAIR;Acc:AT1G70100]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.