Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G263300.1 | Wheat | nucleus | 96.58 | 96.44 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 93.42 | 93.42 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 93.42 | 93.3 |
| Os05t0420500-01 | Rice | nucleus | 44.79 | 45.99 |
| EES18249 | Sorghum | nucleus | 41.37 | 39.37 |
| Zm00001d038217_P002 | Maize | nucleus | 40.0 | 38.73 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 25.89 | 32.98 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 17.12 | 23.41 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 15.21 | 21.06 |
| KRH33693 | Soybean | nucleus | 6.03 | 20.66 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 11.51 | 16.09 |
| PGSC0003DMT400032926 | Potato | nucleus | 10.96 | 15.66 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 11.64 | 15.37 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.55 | 15.37 |
| KRG99370 | Soybean | nucleus | 5.07 | 15.29 |
| KRH16191 | Soybean | nucleus | 7.67 | 15.14 |
| PGSC0003DMT400017939 | Potato | nucleus | 10.27 | 15.12 |
| Solyc02g067950.2.1 | Tomato | extracellular | 10.27 | 15.12 |
| KRH45764 | Soybean | nucleus | 9.73 | 14.73 |
| KRH57609 | Soybean | nucleus | 12.05 | 14.15 |
| KRH07049 | Soybean | nucleus | 9.59 | 14.03 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.36 | 13.56 |
| KRG99221 | Soybean | nucleus | 8.77 | 13.42 |
| KRG97481 | Soybean | nucleus | 11.51 | 12.84 |
| KRG94005 | Soybean | nucleus | 11.37 | 12.61 |
| KRH69438 | Soybean | nucleus | 8.63 | 12.55 |
| KRH74704 | Soybean | nucleus | 9.18 | 12.34 |
| PGSC0003DMT400031254 | Potato | nucleus | 10.82 | 12.25 |
| KRH31410 | Soybean | nucleus | 10.27 | 12.14 |
| PGSC0003DMT400058225 | Potato | nucleus | 9.59 | 11.74 |
| Solyc05g006490.2.1 | Tomato | nucleus | 9.45 | 11.46 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 4.93 | 10.91 |
| Solyc05g014270.2.1 | Tomato | nucleus | 9.59 | 10.51 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.79 | 9.36 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G263200.1 | EnsemblPlantsGene:TraesCS1A01G263200 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF7 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:+:458556890..458562533
Molecular Weight (calculated)
79344.7 Da
IEP (calculated)
10.947
GRAVY (calculated)
-0.895
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVNQNCF AWPHEESSGQ DTSQGTTQVF DHGSISFGRF DLESLAWEKW SVFTNDRRTE EFVKFNGLVA KKKAYFEEYF KRIRELKALE QQNQQTELNL
101: EYSGDGSDSS QTGEDEPVAK HASPAGSGTH VDDSMGQIAA ETTPEHRLGC YKDHNESIGN GISTLTRSSS VGGLQIIGEE TRENASSDKQ NAKCGQDDLL
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTSSYNPDH TVVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERRPVTRDG SRNPAGIANS CRPSTAERRL ATRDLAENQT NIASPCRPST AERRAITKEL APKHANVATP RRPSTADRRP ITKEPAPNNA
401: NIATPRRPST PDRRLTTKEP APKHANIATP QRPSTAERRP TRREVAPKLA GIASPCWPSS AERQPVARGI AEKNADVVTL RRPSTAERRP IKREAAPKHA
501: DVVPLRRPST AERRPVARDN GLKHANVGNP CCPSTPEPCL SRGSAAKHAD VAITPCRPST GERRAVAKEN TLKLDPKTPI RLRAMPGNSN GAMATAATPQ
601: KAITRNLVKT SKPEMKSYAK ERLELQVGGK LKSSSVNLPP RKVLTSNVGA NRVVENIRKP NKQGIQETVG SRVFASKNAT PLQTGSAKTR VPNPPPPPPP
701: RGASQSPSKP SPNKLSVGGR KPKASTPHWH
101: EYSGDGSDSS QTGEDEPVAK HASPAGSGTH VDDSMGQIAA ETTPEHRLGC YKDHNESIGN GISTLTRSSS VGGLQIIGEE TRENASSDKQ NAKCGQDDLL
201: MPNEATMTPK RIIEKCSRIS QASKIIPKTV KMTSSYNPDH TVVSKGPESA KPIVINQKTK PGNIQSLRNP KAATTNVIGT TGRTKRVPKE DPGAIALRRP
301: SSAASQRPST RERRPVTRDG SRNPAGIANS CRPSTAERRL ATRDLAENQT NIASPCRPST AERRAITKEL APKHANVATP RRPSTADRRP ITKEPAPNNA
401: NIATPRRPST PDRRLTTKEP APKHANIATP QRPSTAERRP TRREVAPKLA GIASPCWPSS AERQPVARGI AEKNADVVTL RRPSTAERRP IKREAAPKHA
501: DVVPLRRPST AERRPVARDN GLKHANVGNP CCPSTPEPCL SRGSAAKHAD VAITPCRPST GERRAVAKEN TLKLDPKTPI RLRAMPGNSN GAMATAATPQ
601: KAITRNLVKT SKPEMKSYAK ERLELQVGGK LKSSSVNLPP RKVLTSNVGA NRVVENIRKP NKQGIQETVG SRVFASKNAT PLQTGSAKTR VPNPPPPPPP
701: RGASQSPSKP SPNKLSVGGR KPKASTPHWH
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.