CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25750	Soybean	cytosol	6.61	32.35
Zm00001d024922_P001	Maize	nucleus	6.21	30.39
Solyc02g093720.2.1	Tomato	nucleus	30.46	30.34
AT3G01710.3	Thale cress	nucleus	24.45	29.76
PGSC0003DMT400032926	Potato	nucleus	30.26	29.55
Bra015186.1-P	Field mustard	nucleus	17.84	29.09
Solyc02g067950.2.1	Tomato	extracellular	28.46	28.63
CDX91933	Canola	nucleus	18.24	28.09
PGSC0003DMT400017939	Potato	nucleus	27.45	27.62
Bra000994.1-P	Field mustard	nucleus	19.44	27.48
CDY32377	Canola	nucleus	16.23	27.46
KRH57609	Soybean	nucleus	34.07	27.33
CDX74313	Canola	nucleus	21.84	27.25
CDY33408	Canola	nucleus	19.24	25.81
VIT_14s0219g00090.t01	Wine grape	nucleus	29.26	25.75
KRG94005	Soybean	nucleus	31.06	23.56
KRG99370	Soybean	nucleus	10.22	21.07
HORVU2Hr1G014490.1	Barley	plastid	7.21	19.67
KRH33693	Soybean	nucleus	7.82	18.31
KRH16191	Soybean	nucleus	12.63	17.03
KRG99221	Soybean	nucleus	16.03	16.77
KRH69438	Soybean	nucleus	16.63	16.53
KRH74704	Soybean	nucleus	17.84	16.39
KRH31410	Soybean	nucleus	20.24	16.34
KRH45764	Soybean	nucleus	15.63	16.18
TraesCS2B01G104800.2	Wheat	nucleus	15.23	15.73
TraesCS2D01G087000.1	Wheat	nucleus	14.83	15.32
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	6.21	14.98
KRH50366	Soybean	nucleus	17.64	14.38
GSMUA_Achr6P24150_001	Banana	nucleus	13.03	14.35
KRG97481	Soybean	nucleus	18.64	14.22
OQU79091	Sorghum	nucleus	11.62	14.04
Zm00001d023630_P005	Maize	nucleus	12.83	13.73
TraesCS3A01G404700.2	Wheat	nucleus	15.03	13.09
TraesCS2A01G089100.1	Wheat	nucleus	8.42	12.73
KRG89293	Soybean	nucleus	16.23	12.7
Os01t0885300-01	Rice	nucleus	14.23	12.39
Zm00001d016849_P002	Maize	nucleus	13.83	12.39
GSMUA_Achr6P03270_001	Banana	nucleus	10.22	12.29
TraesCS3D01G400000.1	Wheat	nucleus	14.03	12.26
EES03998	Sorghum	nucleus	13.83	12.17
GSMUA_Achr6P18450_001	Banana	nucleus	12.83	12.14
TraesCS3B01G438400.1	Wheat	nucleus	13.83	12.08
Os02t0558600-01	Rice	nucleus	14.23	11.97
TraesCS6D01G153200.1	Wheat	nucleus	13.23	11.93
GSMUA_Achr7P23570_001	Banana	nucleus	12.63	11.8
Os12t0273700-01	Rice	nucleus	9.42	11.72
TraesCS6B01G192000.1	Wheat	nucleus	12.83	11.57
TraesCS6A01G159300.1	Wheat	nucleus	12.63	11.39
EES06976	Sorghum	nucleus	11.62	11.01
HORVU6Hr1G033310.33	Barley	cytosol	12.42	10.35
Os05t0420500-01	Rice	nucleus	14.63	10.27
HORVU1Hr1G063930.1	Barley	nucleus	14.43	9.86
EES18249	Sorghum	nucleus	15.03	9.78
Zm00001d042598_P003	Maize	mitochondrion	12.42	9.64
TraesCS1A01G263200.1	Wheat	nucleus	14.03	9.59
TraesCS1D01G263300.1	Wheat	nucleus	14.03	9.58
TraesCS1B01G273800.1	Wheat	nucleus	14.03	9.58
Zm00001d038217_P002	Maize	nucleus	13.83	9.15
HORVU2Hr1G014550.1	Barley	cytosol	6.41	5.83

Protein Annotations

EMBL:ACUP02009920	EnsemblPlants:KRH07049	EnsemblPlantsGene:GLYMA_16G064000	EntrezGene:102667040	ncoils:Coil	PANTHER:PTHR31358
PANTHER:PTHR31358:SF12	ProteinID:KRH07049	ProteinID:KRH07049.1	SEG:seg	UniParc:UPI00023D7A24	UniProt:I1MLP7
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:6307477..6311935

Molecular Weight (calculated)

55283.0 Da

IEP (calculated)

10.440

GRAVY (calculated)

-0.858

Length

499 amino acids

Sequence
(BLAST)

001: MYVAEKLNKG DSSACLMQQQ PFCYASGFPK EANKSNPNNA LGQSVSFGRF MPESLAWEKW STFSHNRYVE EAERFTRPGS VAQKKAFFEA HYKKLAAQKA
101: AALLEQANSA SQTQQEQEEA IVDNTHNLNM TSPKSKLVLL EENAQVFNSE PDATTYNSNS NTDAALPQSD MLGGAQPLID HQAFVVKLQN QLGKVDNYKE
201: PSEEGTNFDQ NILQSTGKKK QAVSSFKLLK VIGTPKFNST PVKSKSPSHS SKDGIATPMS NNPALTSSKK EGSTSKLPHM SLNFTLVREI NKLTVSLVRK
301: FGSTGVGASS SKASKDSSTL IKTTTKASKN ESQKHSSLTP LTEAQRSKRK TPIISSPFRL STEERASIRK KKLEKVCNAS ESQKVQPHTK FKEKADTKIR
401: KLRQSICFIA GSSPDFYQDR EASKKDRLTP PESPKEGRKP TLSVVESKSS LPRNRPFQGK NCGTMTLPRT SNSSMITTHE NTSPNIQHRN QNDRNYKQF

Best Arabidopsis Sequence Match ( AT3G26050.1 )
(BLAST)

001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN

Arabidopsis Description

TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.