Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91933 | Canola | nucleus | 37.56 | 47.53 |
| CDX74313 | Canola | nucleus | 41.46 | 42.5 |
| Bra000994.1-P | Field mustard | nucleus | 36.59 | 42.49 |
| CDY33408 | Canola | nucleus | 36.34 | 40.05 |
| Bra015186.1-P | Field mustard | nucleus | 29.02 | 38.89 |
| CDY32377 | Canola | nucleus | 27.56 | 38.31 |
| Solyc02g067950.2.1 | Tomato | extracellular | 32.44 | 26.81 |
| Solyc02g093720.2.1 | Tomato | nucleus | 32.68 | 26.75 |
| PGSC0003DMT400032926 | Potato | nucleus | 31.71 | 25.44 |
| PGSC0003DMT400017939 | Potato | nucleus | 30.73 | 25.4 |
| KRH07049 | Soybean | nucleus | 29.76 | 24.45 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 33.41 | 24.16 |
| AT5G40700.2 | Thale cress | nucleus, plastid | 16.83 | 22.77 |
| AT3G27350.2 | Thale cress | cytosol, nucleus, plastid | 16.83 | 21.63 |
| KRH57609 | Soybean | nucleus | 31.46 | 20.74 |
| KRG94005 | Soybean | nucleus | 30.73 | 19.15 |
| AT1G23060.1 | Thale cress | nucleus | 13.66 | 15.26 |
| AT3G26050.1 | Thale cress | nucleus | 18.78 | 14.45 |
| AT1G70950.1 | Thale cress | nucleus | 16.83 | 14.44 |
| AT1G24160.1 | Thale cress | nucleus | 17.8 | 13.52 |
| AT1G70100.3 | Thale cress | nucleus | 16.34 | 13.29 |
Protein Annotations
| ArrayExpress:AT3G01710 | EnsemblPlants:AT3G01710.3 | EnsemblPlantsGene:AT3G01710 | EntrezGene:821092 | InterPro:TPX2_C | ncoils:Coil |
| PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | PFAM:PF06886 | ProteinID:ANM64629.1 | RefSeq:AT3G01710 | RefSeq:AT3G01710-TAIR-G |
| RefSeq:NP_001326644.1 | SEG:seg | TAIR:AT3G01710 | Unigene:At.47816 | UniParc:UPI000849362B | UniProt:A0A1I9LPX1 |
| MapMan:35.2 | : | : | : | : | : |
Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX1]
Coordinates
chr3:-:259991..261840
Molecular Weight (calculated)
46089.6 Da
IEP (calculated)
10.213
GRAVY (calculated)
-0.976
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW EKWSAFSTQN PYVAEAERYS KPGSVAQKKA FFEAHYKKVA AARKAAAEEA LLLQQQIPKP
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKVSLLSL IAKCMCEVLK
401: EKDSSHRFCV
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKVSLLSL IAKCMCEVLK
401: EKDSSHRFCV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.