Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016172.1-P | Field mustard | nucleus | 38.91 | 38.67 |
| CDX72762 | Canola | nucleus | 36.4 | 38.33 |
| CDX96289 | Canola | nucleus | 38.49 | 37.94 |
| KRG89293 | Soybean | nucleus | 30.13 | 22.57 |
| KRH50366 | Soybean | nucleus | 28.45 | 22.22 |
| VIT_01s0011g04850.t01 | Wine grape | nucleus | 26.99 | 21.75 |
| AT1G23060.1 | Thale cress | nucleus | 15.48 | 20.16 |
| Solyc05g008090.2.1 | Tomato | nucleus | 26.36 | 18.39 |
| AT3G27350.2 | Thale cress | cytosol, nucleus, plastid | 11.3 | 16.93 |
| AT3G01710.3 | Thale cress | nucleus | 14.44 | 16.83 |
| AT1G70100.3 | Thale cress | nucleus | 17.57 | 16.67 |
| PGSC0003DMT400078339 | Potato | nucleus | 23.43 | 16.42 |
| AT5G40700.2 | Thale cress | nucleus, plastid | 10.04 | 15.84 |
| AT1G24160.1 | Thale cress | nucleus | 16.74 | 14.81 |
| AT3G26050.1 | Thale cress | nucleus | 15.48 | 13.88 |
Protein Annotations
| MapMan:20.1.5.2 | EntrezGene:843433 | UniProt:A0A178WIG1 | ProteinID:AAD55508.1 | ProteinID:AEE35143.1 | EMBL:AK176599 |
| ArrayExpress:AT1G70950 | EnsemblPlantsGene:AT1G70950 | RefSeq:AT1G70950 | TAIR:AT1G70950 | RefSeq:AT1G70950-TAIR-G | EnsemblPlants:AT1G70950.1 |
| TAIR:AT1G70950.1 | Unigene:At.50025 | EMBL:BT012555 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008150 | RefSeq:NP_177251.2 |
| ProteinID:OAP18169.1 | PFAM:PF06886 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020100 |
| PANTHER:PTHR31358 | PANTHER:PTHR31358:SF28 | UniProt:Q67Y69 | InterPro:TPX2_C | UniParc:UPI000034F522 | SEG:seg |
Description
WDL7Protein WVD2-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y69]
Coordinates
chr1:+:26752597..26755407
Molecular Weight (calculated)
53247.7 Da
IEP (calculated)
7.829
GRAVY (calculated)
-0.984
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEIQDPFS LSFQGNSIHS GSISFGRFEK EGLSWEKRSS FSHNRYLEEV DKCSKPGSVT EMKAHFEAHF KKKGIRFPAS LESQTWGVHQ TSNEPDDEAV
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.