Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g008090.2.1 | Tomato | nucleus | 53.67 | 53.43 |
| Bra016172.1-P | Field mustard | nucleus | 17.45 | 24.74 |
| CDX96289 | Canola | nucleus | 17.45 | 24.54 |
| CDX72762 | Canola | nucleus | 16.13 | 24.23 |
| AT1G70950.1 | Thale cress | nucleus | 16.42 | 23.43 |
| KRH50366 | Soybean | nucleus | 20.53 | 22.88 |
| VIT_01s0011g04850.t01 | Wine grape | nucleus | 19.35 | 22.26 |
| KRG89293 | Soybean | nucleus | 20.38 | 21.79 |
| PGSC0003DMT400017939 | Potato | nucleus | 11.44 | 15.73 |
| PGSC0003DMT400031254 | Potato | nucleus | 14.81 | 15.66 |
| PGSC0003DMT400032926 | Potato | nucleus | 11.73 | 15.66 |
| PGSC0003DMT400004849 | Potato | nucleus | 8.8 | 13.33 |
| PGSC0003DMT400058225 | Potato | nucleus | 10.41 | 11.91 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400078339 | EnsemblPlantsGene:PGSC0003DMG402030499 | EntrezGene:102582838 | InterPro:TPX2_C | ncoils:Coil | PANTHER:PTHR31358 |
| PANTHER:PTHR31358:SF28 | PFAM:PF06886 | PGSC:PGSC0003DMG402030499 | RefSeq:XP_006344237.1 | SEG:seg | UniParc:UPI000296E800 |
| UniProt:M1CZX2 | MapMan:20.1.5.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402030499]
Coordinates
chr5:-:4200982..4206287
Molecular Weight (calculated)
75951.3 Da
IEP (calculated)
8.550
GRAVY (calculated)
-1.068
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDIEEPFR HSFQADSWQS GSISFGRFEN ESLCWERRSS FTHNRYLEEV EKYSKPGSVT EKKAYFEARL RKKALLRQSS SEWQNGTESQ VSENDGHENT
101: SYEGDFEHVN EIGHSTRFVE NHDRSANLLE NEKYSENDVT ENEGYAGDFE HVNEDGHSAH FDESIDRSIH LLKNGKYQAE NTGYDGDFER VNKVGHPTRF
201: EESLDGSHNG DIEVTECGGV DSIILHSGPQ TELATDSSDV LQSVPEHMEA EANFHLNAGN SAFDDDPKTE IEVKVKLEGQ DSSMEFSSNS VDLSSNAHAT
301: EKDGSVNSEP QRSSSSKVRT VSQSRETKSR MLSQVSVASG KGTISKQAYK DMPSKPNRRH SDVSLTRKGE KPRLDAPGAL LRSTARMPKS EVCSGSKANV
401: LNQQKSTEQQ PKARKAAASR PSCTEKVSHR VHQSVNRDKQ SVSSCQPGMK QNGSGFLFKS EERAKKRKEF LMKLEEKMHA VEAEKHQLQA RTQVKKEAEL
501: KQLRRNLNFK STPMPAFYHE PGRRSDRNKE LVSKTKSSKS QSRPSTSGAR ATSATENTVP CSTSEHLNVA DSPQVSEVTN HPSAELSDSS IPSSAPTSKT
601: SWQTRSNRTV APKREQDKRQ VLNSPRPRTA DTNKGNKGFK AEEKTKVVAR RSIGNNAMRK DIRSIDLSHS TRVGRLAVGV AS
101: SYEGDFEHVN EIGHSTRFVE NHDRSANLLE NEKYSENDVT ENEGYAGDFE HVNEDGHSAH FDESIDRSIH LLKNGKYQAE NTGYDGDFER VNKVGHPTRF
201: EESLDGSHNG DIEVTECGGV DSIILHSGPQ TELATDSSDV LQSVPEHMEA EANFHLNAGN SAFDDDPKTE IEVKVKLEGQ DSSMEFSSNS VDLSSNAHAT
301: EKDGSVNSEP QRSSSSKVRT VSQSRETKSR MLSQVSVASG KGTISKQAYK DMPSKPNRRH SDVSLTRKGE KPRLDAPGAL LRSTARMPKS EVCSGSKANV
401: LNQQKSTEQQ PKARKAAASR PSCTEKVSHR VHQSVNRDKQ SVSSCQPGMK QNGSGFLFKS EERAKKRKEF LMKLEEKMHA VEAEKHQLQA RTQVKKEAEL
501: KQLRRNLNFK STPMPAFYHE PGRRSDRNKE LVSKTKSSKS QSRPSTSGAR ATSATENTVP CSTSEHLNVA DSPQVSEVTN HPSAELSDSS IPSSAPTSKT
601: SWQTRSNRTV APKREQDKRQ VLNSPRPRTA DTNKGNKGFK AEEKTKVVAR RSIGNNAMRK DIRSIDLSHS TRVGRLAVGV AS
001: MAGEIQDPFS LSFQGNSIHS GSISFGRFEK EGLSWEKRSS FSHNRYLEEV DKCSKPGSVT EMKAHFEAHF KKKGIRFPAS LESQTWGVHQ TSNEPDDEAV
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
Arabidopsis Description
WDL7Protein WVD2-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.