Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX96289 | Canola | nucleus | 95.22 | 94.43 |
CDX72762 | Canola | nucleus | 81.5 | 86.34 |
AT1G70950.1 | Thale cress | nucleus | 38.67 | 38.91 |
Bra025270.1-P | Field mustard | nucleus | 12.27 | 23.32 |
VIT_01s0011g04850.t01 | Wine grape | nucleus | 28.48 | 23.1 |
KRH50366 | Soybean | nucleus | 29.11 | 22.88 |
Bra000994.1-P | Field mustard | nucleus | 14.55 | 19.83 |
KRG89293 | Soybean | nucleus | 26.2 | 19.75 |
Bra025552.1-P | Field mustard | nucleus | 12.06 | 19.66 |
Bra015186.1-P | Field mustard | nucleus | 12.27 | 19.28 |
Bra033005.1-P | Field mustard | nucleus | 10.39 | 17.92 |
Bra028471.1-P | Field mustard | nucleus | 11.23 | 17.7 |
PGSC0003DMT400078339 | Potato | nucleus | 24.74 | 17.45 |
Bra024641.1-P | Field mustard | nucleus | 18.3 | 17.43 |
Solyc05g008090.2.1 | Tomato | nucleus | 23.49 | 16.5 |
Bra016236.1-P | Field mustard | nucleus | 16.42 | 16.39 |
Bra016318.1-P | Field mustard | nucleus | 16.01 | 15.78 |
Bra036350.1-P | Field mustard | nucleus | 14.55 | 12.57 |
Bra012357.1-P | Field mustard | nucleus | 6.65 | 9.79 |
Protein Annotations
Description
AT1G70950 (E=9e-169) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23060.1); Has 875 Blast hits to 771 proteins in 143 species: Archae - 0; Bacteria - 102; Metazoa - 281; Fungi - 65; Plants - 205; Viruses - 3; Other Eukaryotes - 219 (source: NCBI BLink).
Coordinates
chrA07:+:19056227..19058538
Molecular Weight (calculated)
53681.5 Da
IEP (calculated)
7.474
GRAVY (calculated)
-0.943
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSEIQEPF SLSFQESSIH SGSISFGRFE EEGLSWEKRS SFSHNRYLEE VDKCSKPGSV TEMKAHFEAH FKKRGMRLPS SIESQTWGVR QTDDDATESF
101: EDYRSDGSFS DNTSRSQSPC NYILDQGKSQ CEYVEESDHC VSYDEIVVNS DDVIELDEEG GVTLDVSLDN DEVVPVECIS IKEVRSEVLG PQEMPLEIEV
201: RDDDEDKKHC AEVQETESRL VEHVPEKASD VTERPSSACE PKSLPNAKPI IPKAVDVTPK AVSGRTKGSY LSANSKTKVD DAKSQKELRP KKTVESRPST
301: SKKIETRTPL ATNRPKTGSY SAKLEMCTGA TSFRFKCSER AEKRKEFYMK LEEKIHAKKT ETNQVQAKTQ QKAEAEIKQF RKSLNFKATP MPSFYNTATR
401: PVSRYKTEPS KVAPSRPRST TSASSTNRRV SRVGDKHGTE EGKMVKATVG NRKPSAAKDS GLQKGNFMAV ETKQKVGKSG N
101: EDYRSDGSFS DNTSRSQSPC NYILDQGKSQ CEYVEESDHC VSYDEIVVNS DDVIELDEEG GVTLDVSLDN DEVVPVECIS IKEVRSEVLG PQEMPLEIEV
201: RDDDEDKKHC AEVQETESRL VEHVPEKASD VTERPSSACE PKSLPNAKPI IPKAVDVTPK AVSGRTKGSY LSANSKTKVD DAKSQKELRP KKTVESRPST
301: SKKIETRTPL ATNRPKTGSY SAKLEMCTGA TSFRFKCSER AEKRKEFYMK LEEKIHAKKT ETNQVQAKTQ QKAEAEIKQF RKSLNFKATP MPSFYNTATR
401: PVSRYKTEPS KVAPSRPRST TSASSTNRRV SRVGDKHGTE EGKMVKATVG NRKPSAAKDS GLQKGNFMAV ETKQKVGKSG N
001: MAGEIQDPFS LSFQGNSIHS GSISFGRFEK EGLSWEKRSS FSHNRYLEEV DKCSKPGSVT EMKAHFEAHF KKKGIRFPAS LESQTWGVHQ TSNEPDDEAV
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
Arabidopsis Description
WDL7Protein WVD2-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.