Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40987 | Canola | nucleus | 52.42 | 50.78 |
| CDX99732 | Canola | nucleus | 46.68 | 48.69 |
| AT3G26050.1 | Thale cress | nucleus | 26.75 | 27.95 |
| Bra015186.1-P | Field mustard | nucleus | 10.41 | 18.95 |
| HORVU2Hr1G014490.1 | Barley | plastid | 6.1 | 18.58 |
| Bra025270.1-P | Field mustard | nucleus | 8.26 | 18.18 |
| Bra033005.1-P | Field mustard | nucleus | 8.98 | 17.92 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 14.9 | 17.18 |
| Bra000994.1-P | Field mustard | nucleus | 10.77 | 17.0 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 10.77 | 16.26 |
| Bra024641.1-P | Field mustard | nucleus | 14.54 | 16.04 |
| OQU79091 | Sorghum | nucleus | 11.67 | 15.74 |
| Bra028471.1-P | Field mustard | nucleus | 8.08 | 14.75 |
| Bra016172.1-P | Field mustard | nucleus | 12.57 | 14.55 |
| Os12t0273700-01 | Rice | nucleus | 10.41 | 14.46 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 12.03 | 13.87 |
| Bra025552.1-P | Field mustard | nucleus | 7.18 | 13.56 |
| Bra016318.1-P | Field mustard | nucleus | 11.85 | 13.52 |
| Zm00001d023630_P005 | Maize | nucleus | 11.31 | 13.52 |
| Bra016236.1-P | Field mustard | nucleus | 11.49 | 13.28 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 7.36 | 12.42 |
| Bra012357.1-P | Field mustard | nucleus | 5.75 | 9.79 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 7.0 | 7.1 |
Protein Annotations
| EnsemblPlants:Bra036350.1 | EnsemblPlants:Bra036350.1-P | EnsemblPlantsGene:Bra036350 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:TPX2_C | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF17 |
| PFAM:PF06886 | SEG:seg | UniParc:UPI0002545B88 | UniProt:M4F5J4 | MapMan:35.2 | : |
Description
AT3G26050 (E=1e-057) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 5651 Blast hits to 1894 proteins in 233 species: Archae - 0; Bacteria - 757; Metazoa - 997; Fungi - 564; Plants - 231; Viruses - 18; Other Eukaryotes - 3084 (source: NCBI BLink).
Coordinates
chrA02:-:22819764..22822238
Molecular Weight (calculated)
61437.0 Da
IEP (calculated)
10.407
GRAVY (calculated)
-1.016
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSVCLARS FSQPADTSSH EVVPRGVLTE SVSFGRFASE TLQWAKWSAF TQNRYLEEVE RFTKPGSVAE KKAFFEAHFK NRASGNTTKT KKTQEGTVLK
101: TVCGAQKENL VDSEVRHGDV VCSSVKTSYE TVCGVLKENL PLVDEVRHVA PSISVTDATA DLRIGEVKDT IAEKIDSMAV DEDEELDKEN SASLSKERRP
201: SSSMPVPEDE DLDKKNSTSL SKERGPSSSA SKTYGRSSNP ELDLPLKKPR KEPLSTKRNQ RRSPPQPFHM SIDCAPTDNA GKKMHQNGSR SSTKVKDALK
301: ADKKERPGPS SVHMPLNSAT STRQTTKTAP KRLARRSTTQ ETSSSNAGTS SKPKGTEPAV ASKGRKRPLS RGAKEDSDVP KCSTTASAFG LPKLPPPPPN
401: SRPLDEKRKN ITGGSSVSSR IPNNVQRQPS ASCDNVPTHS RTRAKSFTVS TPFIFRSDER AEKRKEFFKK VEEKKKKEDA VKEQSSCGFK EHQEFKNPQV
501: GGFQRENIQK SRESPHKVAS VKTSTTRNPS MEKYKRCKVH PSLTKKKTQE DSSPNVL
101: TVCGAQKENL VDSEVRHGDV VCSSVKTSYE TVCGVLKENL PLVDEVRHVA PSISVTDATA DLRIGEVKDT IAEKIDSMAV DEDEELDKEN SASLSKERRP
201: SSSMPVPEDE DLDKKNSTSL SKERGPSSSA SKTYGRSSNP ELDLPLKKPR KEPLSTKRNQ RRSPPQPFHM SIDCAPTDNA GKKMHQNGSR SSTKVKDALK
301: ADKKERPGPS SVHMPLNSAT STRQTTKTAP KRLARRSTTQ ETSSSNAGTS SKPKGTEPAV ASKGRKRPLS RGAKEDSDVP KCSTTASAFG LPKLPPPPPN
401: SRPLDEKRKN ITGGSSVSSR IPNNVQRQPS ASCDNVPTHS RTRAKSFTVS TPFIFRSDER AEKRKEFFKK VEEKKKKEDA VKEQSSCGFK EHQEFKNPQV
501: GGFQRENIQK SRESPHKVAS VKTSTTRNPS MEKYKRCKVH PSLTKKKTQE DSSPNVL
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.