Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99732 | Canola | nucleus | 69.57 | 74.91 |
| Bra036350.1-P | Field mustard | nucleus | 50.78 | 52.42 |
| AT3G26050.1 | Thale cress | nucleus | 26.96 | 29.08 |
| CDX99631 | Canola | cytosol | 6.09 | 24.14 |
| CDY46410 | Canola | cytosol | 6.09 | 21.47 |
| HORVU2Hr1G014490.1 | Barley | plastid | 6.26 | 19.67 |
| CDX83685 | Canola | nucleus | 8.35 | 19.28 |
| CDY13707 | Canola | nucleus | 8.35 | 18.9 |
| CDY32377 | Canola | nucleus | 9.57 | 18.64 |
| CDY48358 | Canola | nucleus | 9.04 | 18.64 |
| CDY34153 | Canola | nucleus | 9.04 | 18.64 |
| CDX91933 | Canola | nucleus | 10.43 | 18.52 |
| CDX74313 | Canola | nucleus | 12.17 | 17.5 |
| CDX72762 | Canola | nucleus | 13.22 | 16.74 |
| CDY33408 | Canola | nucleus | 10.61 | 16.4 |
| CDY11706 | Canola | nucleus | 8.7 | 16.39 |
| CDX67471 | Canola | nucleus | 8.7 | 16.39 |
| CDY42558 | Canola | nucleus | 8.35 | 16.38 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 10.43 | 16.26 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 13.22 | 15.73 |
| CDY36374 | Canola | nucleus | 9.04 | 15.48 |
| CDX96289 | Canola | nucleus | 13.04 | 15.46 |
| CDY25766 | Canola | nucleus | 9.91 | 15.36 |
| Zm00001d023630_P005 | Maize | nucleus | 11.83 | 14.59 |
| OQU79091 | Sorghum | nucleus | 10.43 | 14.53 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 12.17 | 14.49 |
| CDY11620 | Canola | nucleus | 12.35 | 14.49 |
| CDY38789 | Canola | nucleus | 7.48 | 14.43 |
| CDY12493 | Canola | nucleus | 7.65 | 14.06 |
| CDY16238 | Canola | nucleus | 11.48 | 13.04 |
| CDY38790 | Canola | nucleus | 3.13 | 12.95 |
| Os12t0273700-01 | Rice | nucleus | 8.87 | 12.72 |
| CDY14672 | Canola | nucleus | 10.09 | 11.69 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 6.61 | 11.52 |
| CDY46409 | Canola | nucleus | 4.52 | 9.89 |
| CDY15926 | Canola | plastid | 4.0 | 9.27 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 6.43 | 6.74 |
Protein Annotations
| EnsemblPlants:CDY40987 | EnsemblPlantsGene:GSBRNA2T00072260001 | InterPro:TPX2_C | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF17 | PFAM:PF06886 |
| ProteinID:CDY40987 | ProteinID:CDY40987.1 | SEG:seg | UniParc:UPI0004EDE13C | UniProt:A0A078HSZ7 | MapMan:35.2 |
Description
BnaA02g27770DBnaA02g27770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSZ7]
Coordinates
chrLK032487:+:114876..117584
Molecular Weight (calculated)
63426.3 Da
IEP (calculated)
10.475
GRAVY (calculated)
-1.030
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSVCLARS FSQPADTSSH EVVPRGVLTE SVSFGRFASE TLQWAKWSAF TQNRYLEEVE RFTKPGSVAE KKAFFEAHFK NRASGNTTKT KKTQEGTVLK
101: TVCGAQKENL VDSEVRHGDV VCSSVKTSYE TVCGVLKENL PLVDEVRHVA PSISVTDATA DVQIGEVKDT IAENNDSMAV DEDEELDKEN SASLSKERRP
201: RSSMPVPEDE DLDKKNSTSL SKERGPSSSA SKTYGRSSNP ELDLPLKKPR KETLSTKRNQ RRSPPQPFHM SIDCAPTDNA GKKMHQNGSR SSTKVKDALK
301: ADKKERSGPS SVHMPLNSAT STRQTTKTAP KRLARRSTTQ ETSSSNAGTS SKPKGTEPAV ASKGRKRPLS RGAKEDSDVP KCSTTASAFG LPKLPPPPPN
401: SRPLDEKRKN ITGGSSVSSR IPNNVQRQPS ASCDNVPTHS RTRAKSFTVS TPFNFRSDER AEKRKEFFKK IEEKKKKEDA VKEQSSCGFK EHQEFKNPQV
501: GGVQAPMISL TSPRVRRNQT PGRENIQKSR ESPHKVASVK TTTTRNPSME KYKRCKIHPS LTKKKTQEDS SPHVL
101: TVCGAQKENL VDSEVRHGDV VCSSVKTSYE TVCGVLKENL PLVDEVRHVA PSISVTDATA DVQIGEVKDT IAENNDSMAV DEDEELDKEN SASLSKERRP
201: RSSMPVPEDE DLDKKNSTSL SKERGPSSSA SKTYGRSSNP ELDLPLKKPR KETLSTKRNQ RRSPPQPFHM SIDCAPTDNA GKKMHQNGSR SSTKVKDALK
301: ADKKERSGPS SVHMPLNSAT STRQTTKTAP KRLARRSTTQ ETSSSNAGTS SKPKGTEPAV ASKGRKRPLS RGAKEDSDVP KCSTTASAFG LPKLPPPPPN
401: SRPLDEKRKN ITGGSSVSSR IPNNVQRQPS ASCDNVPTHS RTRAKSFTVS TPFNFRSDER AEKRKEFFKK IEEKKKKEDA VKEQSSCGFK EHQEFKNPQV
501: GGVQAPMISL TSPRVRRNQT PGRENIQKSR ESPHKVASVK TTTTRNPSME KYKRCKIHPS LTKKKTQEDS SPHVL
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.