Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99631 | Canola | cytosol | 29.84 | 51.03 |
| CDY42558 | Canola | nucleus | 26.61 | 22.53 |
| CDX67471 | Canola | nucleus | 26.21 | 21.31 |
| CDY11706 | Canola | nucleus | 25.0 | 20.33 |
| CDX83685 | Canola | nucleus | 18.95 | 18.88 |
| CDY13707 | Canola | nucleus | 18.15 | 17.72 |
| CDY36374 | Canola | nucleus | 22.18 | 16.37 |
| CDY48358 | Canola | nucleus | 18.15 | 16.13 |
| CDY34153 | Canola | nucleus | 17.34 | 15.41 |
| CDY46410 | Canola | cytosol | 9.68 | 14.72 |
| AT5G40700.2 | Thale cress | nucleus, plastid | 16.53 | 13.53 |
| CDY32377 | Canola | nucleus | 13.31 | 11.19 |
| CDY38789 | Canola | nucleus | 12.9 | 10.74 |
| CDX91933 | Canola | nucleus | 12.9 | 9.88 |
| CDY33408 | Canola | nucleus | 14.52 | 9.68 |
| CDX74313 | Canola | nucleus | 15.32 | 9.5 |
| CDY25766 | Canola | nucleus | 11.29 | 7.55 |
| CDY11620 | Canola | nucleus | 11.69 | 5.92 |
| PGSC0003DMT400031254 | Potato | nucleus | 15.32 | 5.89 |
| CDY38790 | Canola | nucleus | 3.23 | 5.76 |
| CDX72762 | Canola | nucleus | 10.08 | 5.51 |
| CDY12493 | Canola | nucleus | 6.85 | 5.43 |
| CDX96289 | Canola | nucleus | 10.08 | 5.15 |
| CDY16238 | Canola | nucleus | 10.48 | 5.14 |
| CDY14672 | Canola | nucleus | 9.68 | 4.84 |
| Solyc05g014270.2.1 | Tomato | nucleus | 12.9 | 4.8 |
| CDX99732 | Canola | nucleus | 10.08 | 4.68 |
| CDY46409 | Canola | nucleus | 4.84 | 4.56 |
| CDY40987 | Canola | nucleus | 9.27 | 4.0 |
Protein Annotations
| EnsemblPlants:CDY15926 | EnsemblPlantsGene:GSBRNA2T00090296001 | ncoils:Coil | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | ProteinID:CDY15926 |
| ProteinID:CDY15926.1 | SEG:seg | UniParc:UPI0004EF01AB | UniProt:A0A078FS19 | MapMan:35.2 | : |
Description
BnaA04g11850DBnaA04g11850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS19]
Coordinates
chrLK032059:+:564438..565825
Molecular Weight (calculated)
28132.0 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.728
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLVICASH TSHLRTSSLT PSLNLFHVHA STACASRLDS PMASFPLSII YTIPIPNNSF AAPLSRHESH EDNPIHALSQ SVSFGRFTTE SLEWGKWSNE
101: EEEPKRTSEQ EDVVESKTVI DDDLQAVIEV LDGVEEEENH AEDESSYVEE ERKSVTKNSS LFRSEAPDKA MELVVTRKTS DNLMKNKEKP VRQKFSLLKF
201: FMGNTNTQRQ NSKRKSDKKP NKPFLCLCFN PDVVRETKGP TKTKKRNL
101: EEEPKRTSEQ EDVVESKTVI DDDLQAVIEV LDGVEEEENH AEDESSYVEE ERKSVTKNSS LFRSEAPDKA MELVVTRKTS DNLMKNKEKP VRQKFSLLKF
201: FMGNTNTQRQ NSKRKSDKKP NKPFLCLCFN PDVVRETKGP TKTKKRNL
001: MAESAVLFHS YSFAAPPSRN ESHEDNTMHA LSQSVSFGRF MTENLEWGKW SSFSHKKYVD EAEKFSQPGS VAQKKAFFEA HYKKIAEAKK AKASDQSSDS
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKRKTSK KPFLCLCFKP EMAGETEAGR
301: QR
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKRKTSK KPFLCLCFKP EMAGETEAGR
301: QR
Arabidopsis Description
At5g40700 [Source:UniProtKB/TrEMBL;Acc:Q5PP69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.