Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33408 | Canola | nucleus | 57.29 | 45.43 |
| CDX91933 | Canola | nucleus | 41.36 | 37.65 |
| CDX99631 | Canola | cytosol | 16.27 | 33.1 |
| CDX74313 | Canola | nucleus | 42.71 | 31.5 |
| CDY46410 | Canola | cytosol | 15.59 | 28.22 |
| AT3G01710.3 | Thale cress | nucleus | 38.31 | 27.56 |
| CDY34153 | Canola | nucleus | 24.75 | 26.16 |
| CDY13707 | Canola | nucleus | 22.37 | 25.98 |
| CDY48358 | Canola | nucleus | 24.41 | 25.81 |
| CDX83685 | Canola | nucleus | 21.36 | 25.3 |
| CDY42558 | Canola | nucleus | 23.73 | 23.89 |
| CDY36374 | Canola | nucleus | 27.12 | 23.81 |
| CDX67471 | Canola | nucleus | 23.73 | 22.95 |
| CDY11706 | Canola | nucleus | 23.39 | 22.62 |
| Solyc02g067950.2.1 | Tomato | extracellular | 28.47 | 16.94 |
| Solyc02g093720.2.1 | Tomato | nucleus | 28.14 | 16.57 |
| PGSC0003DMT400017939 | Potato | nucleus | 27.46 | 16.33 |
| PGSC0003DMT400032926 | Potato | nucleus | 28.14 | 16.24 |
| KRH07049 | Soybean | nucleus | 27.46 | 16.23 |
| CDY38789 | Canola | nucleus | 15.93 | 15.77 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 29.83 | 15.52 |
| CDY25766 | Canola | nucleus | 19.32 | 15.36 |
| CDY15926 | Canola | plastid | 11.19 | 13.31 |
| KRH57609 | Soybean | nucleus | 26.78 | 12.7 |
| KRG94005 | Soybean | nucleus | 26.44 | 11.85 |
| CDX96289 | Canola | nucleus | 19.32 | 11.75 |
| CDX72762 | Canola | nucleus | 17.97 | 11.67 |
| CDY14672 | Canola | nucleus | 18.98 | 11.29 |
| CDY16238 | Canola | nucleus | 17.63 | 10.28 |
| CDY11620 | Canola | nucleus | 16.95 | 10.2 |
| CDY38790 | Canola | nucleus | 4.75 | 10.07 |
| CDY40987 | Canola | nucleus | 18.64 | 9.57 |
| CDX99732 | Canola | nucleus | 17.29 | 9.55 |
| CDY12493 | Canola | nucleus | 9.83 | 9.27 |
| CDY46409 | Canola | nucleus | 6.78 | 7.6 |
Protein Annotations
| EnsemblPlants:CDY32377 | EnsemblPlantsGene:GSBRNA2T00051924001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | ProteinID:CDY32377 | ProteinID:CDY32377.1 |
| SEG:seg | UniParc:UPI0004EF3987 | UniProt:A0A078H4G0 | MapMan:35.2 | : | : |
Description
BnaA03g60630DBnaA03g60630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4G0]
Coordinates
chrLK032293:+:152061..153356
Molecular Weight (calculated)
33015.5 Da
IEP (calculated)
10.191
GRAVY (calculated)
-0.734
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW KKWSSFPTQN RYVAEAERYS RPGSVAQKKA FFEAHYKKLA AARKAAAEEA LLLRQLTSDE
101: LVPVQEDING VGKKESDPVL EIPRASLDAE MKVVAEKVSR SGNRQSDEKE NRGKDKSEIN GKGSTVKKEQ QVEEKTPMIL KKKKYKEAQP KSSTKPRVSK
201: LNISERTPSQ KPSSNKSSSY NFTPAKEFNR LNAKLLSGHH KAIIRCLQRE LWRTLCSPHL CLVTEVNAEL MILLPRQVEE DGISFPQGKN SSLIK
101: LVPVQEDING VGKKESDPVL EIPRASLDAE MKVVAEKVSR SGNRQSDEKE NRGKDKSEIN GKGSTVKKEQ QVEEKTPMIL KKKKYKEAQP KSSTKPRVSK
201: LNISERTPSQ KPSSNKSSSY NFTPAKEFNR LNAKLLSGHH KAIIRCLQRE LWRTLCSPHL CLVTEVNAEL MILLPRQVEE DGISFPQGKN SSLIK
001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW EKWSAFSTQN PYVAEAERYS KPGSVAQKKA FFEAHYKKVA AARKAAAEEA LLLQQQIPKP
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTSKCRG KIAPNSSAKT
301: GRGRWNFLPA ETPSCFTPFG LRTEERAERR KKKLEGKFKE METQNQKAEE RSVEKEESKL RQRLCFKAKP LPNFYKQRPK STDQTKKALL Q
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTSKCRG KIAPNSSAKT
301: GRGRWNFLPA ETPSCFTPFG LRTEERAERR KKKLEGKFKE METQNQKAEE RSVEKEESKL RQRLCFKAKP LPNFYKQRPK STDQTKKALL Q
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.