Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33408 | Canola | nucleus | 52.78 | 45.97 |
| CDY32377 | Canola | nucleus | 37.65 | 41.36 |
| AT3G01710.3 | Thale cress | nucleus | 47.53 | 37.56 |
| CDX74313 | Canola | nucleus | 46.3 | 37.5 |
| CDX99631 | Canola | cytosol | 14.81 | 33.1 |
| CDX83685 | Canola | nucleus | 20.68 | 26.91 |
| CDY13707 | Canola | nucleus | 20.68 | 26.38 |
| CDY34153 | Canola | nucleus | 22.53 | 26.16 |
| CDY48358 | Canola | nucleus | 22.22 | 25.81 |
| CDY42558 | Canola | nucleus | 21.91 | 24.23 |
| CDY46410 | Canola | cytosol | 12.04 | 23.93 |
| CDX67471 | Canola | nucleus | 22.22 | 23.61 |
| CDY11706 | Canola | nucleus | 21.91 | 23.28 |
| CDY36374 | Canola | nucleus | 24.07 | 23.21 |
| Solyc02g067950.2.1 | Tomato | extracellular | 30.25 | 19.76 |
| PGSC0003DMT400032926 | Potato | nucleus | 30.56 | 19.37 |
| Solyc02g093720.2.1 | Tomato | nucleus | 29.94 | 19.36 |
| PGSC0003DMT400017939 | Potato | nucleus | 29.32 | 19.15 |
| KRH07049 | Soybean | nucleus | 28.09 | 18.24 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 31.79 | 18.17 |
| CDY38789 | Canola | nucleus | 16.36 | 17.79 |
| KRH57609 | Soybean | nucleus | 31.79 | 16.56 |
| CDY25766 | Canola | nucleus | 18.83 | 16.44 |
| KRG94005 | Soybean | nucleus | 27.78 | 13.68 |
| CDX72762 | Canola | nucleus | 19.14 | 13.66 |
| CDY15926 | Canola | plastid | 9.88 | 12.9 |
| CDX96289 | Canola | nucleus | 18.83 | 12.58 |
| CDY16238 | Canola | nucleus | 19.14 | 12.25 |
| CDY11620 | Canola | nucleus | 17.9 | 11.84 |
| CDY14672 | Canola | nucleus | 17.59 | 11.49 |
| CDX99732 | Canola | nucleus | 17.59 | 10.67 |
| CDY40987 | Canola | nucleus | 18.52 | 10.43 |
| CDY38790 | Canola | nucleus | 4.32 | 10.07 |
| CDY12493 | Canola | nucleus | 8.64 | 8.95 |
| CDY46409 | Canola | nucleus | 7.1 | 8.75 |
Protein Annotations
| EnsemblPlants:CDX91933 | EnsemblPlantsGene:GSBRNA2T00153567001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | ProteinID:CDX91933 | ProteinID:CDX91933.1 |
| SEG:seg | UniParc:UPI0004EEF9F6 | MapMan:35.2 | : | : | : |
Description
BnaC03g32350D
Coordinates
chrLK031870:+:881606..884523
Molecular Weight (calculated)
36265.6 Da
IEP (calculated)
10.634
GRAVY (calculated)
-1.040
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSERLDW EKWSSFPTQN RYVAEAERYS RPGSVAQKKA FFEAHYKKLA AARKAAAEEA LLLRQQTSDE
101: LVPVQEEDIN GVGKKESDPP VPEMKVVAEK VSRSSGNRQS DEKENRRKTE SEINGKGSTV KEEQQVGEKT PMILLKKKKS KEAQPKSSTK PRMSKLNISE
201: RTPSQKPSNE SSSYNFTPAK EFNRLVSIIR KIDRSSRASS SSKLQTKECK TPLRTPSGSN NNKVSAKEDS LFTTPLSSNR RAPDSSTKTG RGRWNFLPAE
301: TPSCFTPFGL RTEERAERRR KKAR
101: LVPVQEEDIN GVGKKESDPP VPEMKVVAEK VSRSSGNRQS DEKENRRKTE SEINGKGSTV KEEQQVGEKT PMILLKKKKS KEAQPKSSTK PRMSKLNISE
201: RTPSQKPSNE SSSYNFTPAK EFNRLVSIIR KIDRSSRASS SSKLQTKECK TPLRTPSGSN NNKVSAKEDS LFTTPLSSNR RAPDSSTKTG RGRWNFLPAE
301: TPSCFTPFGL RTEERAERRR KKAR
001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW EKWSAFSTQN PYVAEAERYS KPGSVAQKKA FFEAHYKKVA AARKAAAEEA LLLQQQIPKP
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKALLQ
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKALLQ
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.