Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025552.1-P | Field mustard | nucleus | 77.08 | 87.8 |
| CDY42558 | Canola | nucleus | 65.18 | 74.74 |
| CDX99631 | Canola | cytosol | 25.89 | 60.0 |
| CDX67471 | Canola | nucleus | 41.96 | 46.23 |
| CDY11706 | Canola | nucleus | 41.67 | 45.9 |
| CDX83685 | Canola | nucleus | 29.46 | 39.76 |
| CDY13707 | Canola | nucleus | 27.98 | 37.01 |
| AT5G40700.2 | Thale cress | nucleus, plastid | 33.33 | 36.96 |
| CDY34153 | Canola | nucleus | 27.38 | 32.97 |
| CDY48358 | Canola | nucleus | 27.08 | 32.62 |
| CDY46410 | Canola | cytosol | 13.39 | 27.61 |
| CDY32377 | Canola | nucleus | 23.81 | 27.12 |
| CDX91933 | Canola | nucleus | 23.21 | 24.07 |
| CDY15926 | Canola | plastid | 16.37 | 22.18 |
| CDY33408 | Canola | nucleus | 22.62 | 20.43 |
| CDX74313 | Canola | nucleus | 23.51 | 19.75 |
| CDY38789 | Canola | nucleus | 16.37 | 18.46 |
| CDX72762 | Canola | nucleus | 17.56 | 13.0 |
| CDY16238 | Canola | nucleus | 19.35 | 12.85 |
| CDY14672 | Canola | nucleus | 18.75 | 12.7 |
| CDY25766 | Canola | nucleus | 13.69 | 12.4 |
| CDX96289 | Canola | nucleus | 17.56 | 12.16 |
| CDY11620 | Canola | nucleus | 17.56 | 12.04 |
| PGSC0003DMT400031254 | Potato | nucleus | 19.94 | 10.39 |
| Solyc05g014270.2.1 | Tomato | nucleus | 18.75 | 9.46 |
| CDX99732 | Canola | nucleus | 14.88 | 9.36 |
| CDY38790 | Canola | nucleus | 3.87 | 9.35 |
| CDY46409 | Canola | nucleus | 7.14 | 9.13 |
| CDY40987 | Canola | nucleus | 15.48 | 9.04 |
| CDY12493 | Canola | nucleus | 7.74 | 8.31 |
Protein Annotations
| EnsemblPlants:CDY36374 | EnsemblPlantsGene:GSBRNA2T00060417001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | ProteinID:CDY36374 | ProteinID:CDY36374.1 |
| SEG:seg | UniParc:UPI0004EF1A85 | UniProt:A0A078HG32 | MapMan:35.2 | : | : |
Description
BnaC04g32820DBnaC04g32820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG32]
Coordinates
chrLK032374:-:209880..211447
Molecular Weight (calculated)
38269.0 Da
IEP (calculated)
5.429
GRAVY (calculated)
-0.776
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESAVLFHS YSFGAPSLSR NETHQDNTKH ALSQSVSFGR FATENLEWGK WSSFSHKKYV DEAEKYSQPG SVAQKKAFFD AHYKKIAESK KAKASLDESK
101: QQQQPESVAV LLNTLETLTK DEVKEEESGE TELVKEEPET KCVVVVLEQE DVVVGSSLAE PVSEDDLQAV VDVLDEREED EELLKKSSPV EEKEEERKFV
201: TNKSSVFPSE TPDKAMELVV TQKLSEDSIK KNEKSVRPRF SFLKLLMGST KAQRQNSKKR TDKKPNKPFL CLCFNPEMVR ETEGPTKTME RNISEDKDRL
301: FSAGFKALRK VCPQDSRIFE CTVAKQLEYH KFVLYL
101: QQQQPESVAV LLNTLETLTK DEVKEEESGE TELVKEEPET KCVVVVLEQE DVVVGSSLAE PVSEDDLQAV VDVLDEREED EELLKKSSPV EEKEEERKFV
201: TNKSSVFPSE TPDKAMELVV TQKLSEDSIK KNEKSVRPRF SFLKLLMGST KAQRQNSKKR TDKKPNKPFL CLCFNPEMVR ETEGPTKTME RNISEDKDRL
301: FSAGFKALRK VCPQDSRIFE CTVAKQLEYH KFVLYL
001: MAESAVLFHS YSFAAPPSRN ESHEDNTMHA LSQSVSFGRF MTENLEWGKW SSFSHKKYVD EAEKFSQPGS VAQKKAFFEA HYKKIAEAKK AKASDQSSDS
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKRKTSK KPFLCLCFKP EMAGETEAGR
301: QR
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKRKTSK KPFLCLCFKP EMAGETEAGR
301: QR
Arabidopsis Description
At5g40700 [Source:UniProtKB/TrEMBL;Acc:Q5PP69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.