Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024641.1-P | Field mustard | nucleus | 58.5 | 58.61 |
| AT1G24160.1 | Thale cress | nucleus | 53.56 | 50.19 |
| CDY14672 | Canola | nucleus | 49.01 | 50.0 |
| CDY46410 | Canola | cytosol | 12.45 | 38.65 |
| CDY11620 | Canola | nucleus | 35.97 | 37.14 |
| CDY46409 | Canola | nucleus | 17.79 | 34.22 |
| KRH33693 | Soybean | nucleus | 12.45 | 29.58 |
| KRH69438 | Soybean | nucleus | 29.05 | 29.28 |
| KRH45764 | Soybean | nucleus | 27.67 | 29.05 |
| VIT_01s0026g00960.t01 | Wine grape | nucleus | 28.66 | 28.27 |
| CDY38789 | Canola | nucleus | 16.6 | 28.19 |
| KRG99221 | Soybean | nucleus | 25.89 | 27.46 |
| PGSC0003DMT400004849 | Potato | nucleus | 23.32 | 26.22 |
| CDX99631 | Canola | cytosol | 7.51 | 26.21 |
| KRH74704 | Soybean | nucleus | 26.88 | 25.05 |
| CDX83685 | Canola | nucleus | 11.86 | 24.1 |
| KRH16191 | Soybean | nucleus | 16.6 | 22.7 |
| KRG99370 | Soybean | nucleus | 10.67 | 22.31 |
| CDY13707 | Canola | nucleus | 10.67 | 21.26 |
| CDY11706 | Canola | nucleus | 12.45 | 20.66 |
| CDY48358 | Canola | nucleus | 11.26 | 20.43 |
| CDY38790 | Canola | nucleus | 5.53 | 20.14 |
| CDY34153 | Canola | nucleus | 11.07 | 20.07 |
| CDY42558 | Canola | nucleus | 11.26 | 19.45 |
| CDY36374 | Canola | nucleus | 12.85 | 19.35 |
| CDX91933 | Canola | nucleus | 12.25 | 19.14 |
| CDX67471 | Canola | nucleus | 11.46 | 19.02 |
| CDX74313 | Canola | nucleus | 15.02 | 19.0 |
| CDY25766 | Canola | nucleus | 13.64 | 18.6 |
| CDY33408 | Canola | nucleus | 13.04 | 17.74 |
| CDY32377 | Canola | nucleus | 10.28 | 17.63 |
| CDX72762 | Canola | nucleus | 14.62 | 16.3 |
| Solyc04g005060.2.1 | Tomato | nucleus | 11.46 | 15.51 |
| Solyc05g006490.2.1 | Tomato | nucleus | 18.18 | 15.28 |
| PGSC0003DMT400058225 | Potato | nucleus | 17.79 | 15.1 |
| CDX96289 | Canola | nucleus | 14.43 | 15.05 |
| CDX99732 | Canola | nucleus | 13.64 | 12.92 |
| CDY40987 | Canola | nucleus | 13.04 | 11.48 |
| CDY12493 | Canola | nucleus | 6.92 | 11.18 |
| CDY15926 | Canola | plastid | 5.14 | 10.48 |
Protein Annotations
| EnsemblPlants:CDY16238 | EnsemblPlantsGene:GSBRNA2T00090700001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF17 | ProteinID:CDY16238 | ProteinID:CDY16238.1 |
| SEG:seg | UniParc:UPI0004EDC79B | UniProt:A0A078FV07 | MapMan:35.2 | : | : |
Description
BnaA09g29720DBnaA09g29720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV07]
Coordinates
chrLK032061:+:699392..702235
Molecular Weight (calculated)
55628.1 Da
IEP (calculated)
10.178
GRAVY (calculated)
-0.865
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDMQVGVAN IDDKGFYGMM EDKPGASSSP TLQVSVSFGR FENDSLSWEK FSAFSPNKYL EEVGKCATPG SVAQKKAYFE AHYKKIAERK AEIMDQEKLM
101: DNKNASFRSV VTDQGSTEGG SVTESVVDTE EDKHVTDVAA EVKELNEETI VVKECQSSVD EVKEEVKNSV DSPRLEKPKE FALVEEKPEV VLQIDEKEEE
201: EVREDVSETV LSNDTTGKTD ETPKKEMEKE KTQKLIKKGG NVGVNRTRSS PKPEQVRTKP TTNKIVTSKK TPPSKEVKNM IKPTKKPAAP ISKAPPGFST
301: PRVYKPASKL PSLSTSQSSV KKEKASSLLR NKQTAPKSLH MSMTLGPSAS DPTALTSTRK SLIMERMGDK DIVKRAFKSF QKSYDLDASV NEHKPALKQN
401: PAKSTSIPSV ATRQKDNARP AKASVMEKRI STSAHGFSAS RGLKSNVTAE KQQKELSKSG ARPVEKTRLQ KSPKAGVVDA KTRKESMNPK AKPVRTLPKV
501: SSDKML
101: DNKNASFRSV VTDQGSTEGG SVTESVVDTE EDKHVTDVAA EVKELNEETI VVKECQSSVD EVKEEVKNSV DSPRLEKPKE FALVEEKPEV VLQIDEKEEE
201: EVREDVSETV LSNDTTGKTD ETPKKEMEKE KTQKLIKKGG NVGVNRTRSS PKPEQVRTKP TTNKIVTSKK TPPSKEVKNM IKPTKKPAAP ISKAPPGFST
301: PRVYKPASKL PSLSTSQSSV KKEKASSLLR NKQTAPKSLH MSMTLGPSAS DPTALTSTRK SLIMERMGDK DIVKRAFKSF QKSYDLDASV NEHKPALKQN
401: PAKSTSIPSV ATRQKDNARP AKASVMEKRI STSAHGFSAS RGLKSNVTAE KQQKELSKSG ARPVEKTRLQ KSPKAGVVDA KTRKESMNPK AKPVRTLPKV
501: SSDKML
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.