Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004849 | Potato | nucleus | 45.99 | 38.22 |
| VIT_01s0026g00960.t01 | Wine grape | nucleus | 21.12 | 15.4 |
| KRH69438 | Soybean | nucleus | 20.32 | 15.14 |
| KRG99221 | Soybean | nucleus | 17.91 | 14.05 |
| CDY14672 | Canola | nucleus | 18.18 | 13.71 |
| CDY11620 | Canola | nucleus | 17.11 | 13.06 |
| Bra016236.1-P | Field mustard | nucleus | 16.58 | 12.86 |
| KRH45764 | Soybean | nucleus | 16.31 | 12.66 |
| AT1G70100.3 | Thale cress | nucleus | 16.84 | 12.5 |
| Bra016318.1-P | Field mustard | nucleus | 16.04 | 12.3 |
| AT1G24160.1 | Thale cress | nucleus | 17.38 | 12.04 |
| Bra024641.1-P | Field mustard | nucleus | 16.04 | 11.88 |
| KRH74704 | Soybean | nucleus | 16.84 | 11.6 |
| CDY16238 | Canola | nucleus | 15.51 | 11.46 |
| Zm00001d024922_P001 | Maize | nucleus | 2.67 | 9.8 |
| CDY46410 | Canola | cytosol | 4.01 | 9.2 |
| KRG99370 | Soybean | nucleus | 5.88 | 9.09 |
| KRH33693 | Soybean | nucleus | 5.08 | 8.92 |
| KRH16191 | Soybean | nucleus | 8.56 | 8.65 |
| OQU79091 | Sorghum | nucleus | 9.36 | 8.47 |
| Zm00001d016849_P002 | Maize | nucleus | 12.3 | 8.26 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.7 | 7.98 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 9.63 | 7.95 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 4.28 | 7.73 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 11.76 | 7.71 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 11.23 | 7.59 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 11.5 | 7.53 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 8.29 | 7.47 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 10.96 | 7.41 |
| EES06976 | Sorghum | nucleus | 10.43 | 7.4 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 6.42 | 7.27 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 10.7 | 7.23 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 10.96 | 7.16 |
| Solyc02g067950.2.1 | Tomato | extracellular | 9.36 | 7.06 |
| CDY38789 | Canola | nucleus | 5.35 | 6.71 |
| EES03998 | Sorghum | nucleus | 10.16 | 6.7 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 9.36 | 6.55 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 10.43 | 6.51 |
| Os01t0885300-01 | Rice | nucleus | 9.89 | 6.46 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 8.29 | 6.42 |
| Os02t0558600-01 | Rice | nucleus | 10.16 | 6.41 |
| Solyc05g014270.2.1 | Tomato | nucleus | 10.43 | 5.86 |
| Zm00001d042598_P003 | Maize | mitochondrion | 9.89 | 5.75 |
| Solyc05g006490.2.1 | Tomato | nucleus | 9.09 | 5.65 |
| Zm00001d023630_P005 | Maize | nucleus | 6.95 | 5.58 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 7.22 | 5.12 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 9.89 | 5.07 |
| Solyc05g008090.2.1 | Tomato | nucleus | 9.09 | 4.96 |
| HORVU2Hr1G014490.1 | Barley | plastid | 2.41 | 4.92 |
| TraesCS1A01G263200.1 | Wheat | nucleus | 9.36 | 4.79 |
| TraesCS2D01G087000.1 | Wheat | nucleus | 6.15 | 4.76 |
| Os12t0273700-01 | Rice | nucleus | 5.08 | 4.74 |
| EES18249 | Sorghum | nucleus | 9.63 | 4.69 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 9.09 | 4.65 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 8.56 | 4.38 |
| Zm00001d038217_P002 | Maize | nucleus | 8.56 | 4.24 |
| Os05t0420500-01 | Rice | nucleus | 7.75 | 4.08 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 5.35 | 3.64 |
Protein Annotations
| EnsemblPlants:Solyc04g005060.2.1 | EnsemblPlantsGene:Solyc04g005060.2 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF17 | SEG:seg | UniParc:UPI0002765FCB |
| UniProt:K4BNB2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:54395..58347
Molecular Weight (calculated)
40926.3 Da
IEP (calculated)
10.669
GRAVY (calculated)
-0.894
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQVESLDEP HIQDRNESTQ VFDTHGVEET TRADVNNSDM KVNSLLVLID KEGEILETGD NGEVSNLEKH ESCEIGSQDD HKEISQVDNE AKISSAKKSK
101: TPKSNLKNTA RKVHPTTEDR ISAGTKKKLA SPVTKSSRIS TPTSKPTPAS KVISSSQTSV KKVNGVSYQR SSNSPVAQSN KLLSRSLISP SQSSIKKLNS
201: STLQRSKNSS TLENKRIAPT SLHMSLSLGP PNSTASTNTM RKSLIMDRMG DKDIVKRAFK AFQSSFNQGK PEVDTRYSGS KKVLPKGSEK KISASPTPKK
301: EVERLRKTSD AVITQKCQSG TRSNSLSSRA PKDAVIERKK VNTVRPAGMS IDRSIDKLKE DIIKGKIHRA GSNR
101: TPKSNLKNTA RKVHPTTEDR ISAGTKKKLA SPVTKSSRIS TPTSKPTPAS KVISSSQTSV KKVNGVSYQR SSNSPVAQSN KLLSRSLISP SQSSIKKLNS
201: STLQRSKNSS TLENKRIAPT SLHMSLSLGP PNSTASTNTM RKSLIMDRMG DKDIVKRAFK AFQSSFNQGK PEVDTRYSGS KKVLPKGSEK KISASPTPKK
301: EVERLRKTSD AVITQKCQSG TRSNSLSSRA PKDAVIERKK VNTVRPAGMS IDRSIDKLKE DIIKGKIHRA GSNR
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.