Factsheet for GSMUA_Achr7P23570_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P18450_001	Banana	nucleus	36.52	37.0
Os01t0885300-01	Rice	nucleus	22.47	20.94
TraesCS3A01G404700.2	Wheat	nucleus	22.28	20.77
EES03998	Sorghum	nucleus	21.35	20.11
TraesCS3D01G400000.1	Wheat	nucleus	21.35	19.96
TraesCS3B01G438400.1	Wheat	nucleus	21.35	19.96
GSMUA_Achr6P24150_001	Banana	nucleus	16.85	19.87
TraesCS1A01G263200.1	Wheat	nucleus	23.41	17.12
TraesCS1D01G263300.1	Wheat	nucleus	23.22	16.96
HORVU1Hr1G063930.1	Barley	nucleus	23.03	16.85
TraesCS1B01G273800.1	Wheat	nucleus	22.66	16.55
KRG99370	Soybean	nucleus	7.49	16.53
Zm00001d042598_P003	Maize	mitochondrion	19.85	16.49
Os05t0420500-01	Rice	nucleus	21.54	16.17
KRH33693	Soybean	nucleus	6.37	15.96
VIT_18s0001g05830.t01	Wine grape	nucleus	15.54	15.9
KRH16191	Soybean	nucleus	10.49	15.14
EES18249	Sorghum	nucleus	21.72	15.12
Zm00001d038217_P002	Maize	nucleus	21.16	14.99
Solyc02g093720.2.1	Tomato	nucleus	13.86	14.77
PGSC0003DMT400032926	Potato	nucleus	14.04	14.68
KRG99221	Soybean	nucleus	12.92	14.47
KRH69438	Soybean	nucleus	12.92	13.74
Solyc02g067950.2.1	Tomato	extracellular	12.36	13.31
PGSC0003DMT400004849	Potato	nucleus	10.86	12.89
KRH45764	Soybean	nucleus	11.61	12.86
KRH07049	Soybean	nucleus	11.8	12.63
PGSC0003DMT400017939	Potato	nucleus	11.24	12.1
KRH57609	Soybean	nucleus	13.67	11.74
PGSC0003DMT400058225	Potato	nucleus	12.92	11.58
KRH31410	Soybean	nucleus	13.3	11.49
PGSC0003DMT400031254	Potato	nucleus	13.86	11.47
KRG94005	Soybean	nucleus	13.67	11.09
GSMUA_Achr6P03270_001	Banana	nucleus	8.61	11.08
KRH74704	Soybean	nucleus	11.05	10.87
KRG97481	Soybean	nucleus	13.3	10.86
Solyc05g006490.2.1	Tomato	nucleus	12.17	10.8
Solyc05g014270.2.1	Tomato	nucleus	12.92	10.36
Solyc04g005060.2.1	Tomato	nucleus	6.55	9.36

Protein Annotations

EnsemblPlants:GSMUA_Achr7P23570_001	EnsemblPlants:GSMUA_Achr7T23570_001	EnsemblPlantsGene:GSMUA_Achr7G23570_001	PANTHER:PTHR31358	PANTHER:PTHR31358:SF5	UniParc:UPI000294B06A
UniProt:M0TK43	MapMan:35.2	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G23570_001]

Coordinates

chr7:-:25705090..25710264

Molecular Weight (calculated)

58867.2 Da

IEP (calculated)

10.341

GRAVY (calculated)

-0.998

Length

534 amino acids

Sequence
(BLAST)

001: MATDVDQAYQ GWSQGELSDG DTSQEIPVSQ MLDHGSISFG RFPIESLSWE RRSVFTHNRC QEELEKFNGL VAKKKAYFEE RYRRIRAMKA QQNVRQNQHT
101: ELTLDYGGDG SMSSQSGEED GAASQHERFK DGASNNVHSI PEETKPGVTL EQEINCNEPP QERCFNPDST LPNPDSSRGI PENTEQDKNT LDTTMLVQPM
201: ETESSLPLTG DLKETKSNSS SKLDNKEILL KPKSLESNIE PRRVAPDTKK IKSEQLQSIR KPLHHKSLSK DPAAVRNGLN MKQETKSNGV HSSKGLKTPS
301: QKTASQTLSK IIASRVKSNA MSTLVDLNQP LTKARSISTT LGPFTLVMER RARSRGNSTK LDSGSSNMLA SSQIQAKGGS SVQDTKKTAS SSGMTSRRGP
401: ETKRNLKEVK KKPLAVDSHY ANLKKIEAHV LGPPKSRSSE LPARNKSICN VGTEPHIATA EGMKRKEGNA RMREFQRGTI KTTGPSKSGN MPMDTKQALA
501: GRGADVSRGG SKSKLDDPSL DGRKTSRRET PHWR

Best Arabidopsis Sequence Match ( AT1G70100.6 )
(BLAST)

001: MVDMEVGIAS GEDKITTAAS SNQELQVSVS FGKFENDSLS WEKFSSFSPN KYLEEVEKCA TAGSVAQKKA YFESHYKKIA ERRADIIMEQ EKLLERNASF
101: RPNIQNRERT DDSDNDESMM IEFSTGYGSN GESTSEEDKL VTVIVTEVNE TCNHKPLEET MDFKECRSSV DTGDDLSTLK LEEKLEEIVQ VEDKEKVEEV
201: ICMKEEVKED VPSKDTGEMS ETLMKETKKE KDHNPIKKTD KNVRTNHMRA SPKSNQVTKK PVTSKVVSGR KTQPSKEKSM TKATNKAASP VLKPPGFSTP
301: RVSKSASTIS SMSTSRSSVK KESVSTLLRK KQTAPKSLPI SLNVDQSVSD PTAVPTTRKS LIMERMGDKD IVRRAFKSFQ KSFDQMKSTD DGQDTAPKQV
401: LAKATAVQRL GTTGQKNVRL AKSDGTERKG PNSHRSSSVV SKSNGTAEKQ KDPSRLGTRA VERIHLQAKP KAEASNVKTR RQSLNPKENP IQGPLPKGYS
501: DKVL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits to 2309 proteins in 344 species: Archae - 6; Bacteria - 672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses - 37; Other Eukaryot /.../83 (source: NCBI BLink). [Source:TAIR;Acc:AT1G70100]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.