Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03998 | Sorghum | nucleus | 51.83 | 52.38 |
| TraesCS3D01G400000.1 | Wheat | nucleus | 47.29 | 47.46 |
| TraesCS3B01G438400.1 | Wheat | nucleus | 46.42 | 46.58 |
| TraesCS3A01G404700.2 | Wheat | nucleus | 43.63 | 43.63 |
| Zm00001d042598_P003 | Maize | mitochondrion | 44.85 | 39.97 |
| Os05t0420500-01 | Rice | nucleus | 33.33 | 26.86 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 20.94 | 22.47 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 18.85 | 20.49 |
| Os02t0558600-01 | Rice | nucleus | 19.72 | 19.06 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 16.93 | 18.58 |
| KRG99370 | Soybean | nucleus | 7.68 | 18.18 |
| KRH33693 | Soybean | nucleus | 6.63 | 17.84 |
| Solyc02g067950.2.1 | Tomato | extracellular | 14.31 | 16.53 |
| KRH16191 | Soybean | nucleus | 10.65 | 16.49 |
| KRG99221 | Soybean | nucleus | 13.26 | 15.93 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.96 | 15.66 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.61 | 15.57 |
| KRH69438 | Soybean | nucleus | 13.44 | 15.34 |
| PGSC0003DMT400017939 | Potato | nucleus | 13.26 | 15.32 |
| PGSC0003DMT400004849 | Potato | nucleus | 11.69 | 14.89 |
| KRH74704 | Soybean | nucleus | 13.61 | 14.36 |
| KRH45764 | Soybean | nucleus | 12.04 | 14.32 |
| KRH07049 | Soybean | nucleus | 12.39 | 14.23 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.09 | 12.46 |
| Os12t0273700-01 | Rice | nucleus | 8.55 | 12.22 |
| KRH57609 | Soybean | nucleus | 13.26 | 12.22 |
| PGSC0003DMT400058225 | Potato | nucleus | 12.57 | 12.08 |
| KRG97481 | Soybean | nucleus | 13.61 | 11.93 |
| Solyc05g014270.2.1 | Tomato | nucleus | 13.44 | 11.56 |
| KRH31410 | Soybean | nucleus | 12.39 | 11.49 |
| PGSC0003DMT400031254 | Potato | nucleus | 12.39 | 11.01 |
| KRG94005 | Soybean | nucleus | 12.39 | 10.79 |
| Solyc04g005060.2.1 | Tomato | nucleus | 6.46 | 9.89 |
Protein Annotations
| EMBL:AK067070 | EMBL:AK102068 | EnsemblPlants:Os01t0885300-01 | EnsemblPlantsGene:Os01g0885300 | EntrezGene:4324882 | ncoils:Coil |
| PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | ProteinID:BAF06937.1 | ProteinID:BAS75600.1 | RefSeq:XP_015622357.1 | SEG:seg |
| UniParc:UPI0000DD8E3F | UniProt:Q0JH41 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os01t0885300-01);Hypothetical conserved gene. (Os01t0885300-02);Conserved hypothetical protein. (Os01t0885300-03)
Coordinates
chr1:-:38454843..38460529
Molecular Weight (calculated)
62899.4 Da
IEP (calculated)
10.672
GRAVY (calculated)
-1.008
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAAEVNQTF FAWSQGEPTE RDGSQGVSVS QKIDHGSISF GRFELESLSW EKWSVFSDDK RHEEFGKFNG LVAQKKAYFE EYYRKIRELK AQQQNQQTEL
101: ILEYSGDGSD SSQTGEYTQG AELETPTGSG TIVDDYVEQG AHETTSEQGL TCYDDHENEN FNAEFSSSNI SSSAVGLQQT GRDARENVHG DDSAGKMDLE
201: QQNAISGHSL GTAYEVVRAP KRIIEKDSRL RYAPKIVPKS VKTSSDSPLD RTSVSKRPDS LKLGMSINQK AKTDNDRLLR GPNVAPHKMS GSTERNKLTT
301: KQTGVRRPSS ASSQRPSVGE RHRIARESIK KPADVSTPRR PSTAERHPVT TERARKQADV DTPRRPSTSE RRAVNKGSAD MTTTHRPSTG ERRSVTRESV
401: LKMDVRTPSK TRPTMTQLKG ATTTVGIVKK AGTPNASKSI NMGTKSNIRE LEGPSKVGRH SVGSKITDLQ IAGKQKSSSV HLPPRKLLSS SIGEPALQTF
501: TRPKKKDVAA QSRASTSKRA MTLHTGNVKG RSSNPPPPPP PPRRPSRTTN RPNGSNSSTV GQKPKVSSAP KWH
101: ILEYSGDGSD SSQTGEYTQG AELETPTGSG TIVDDYVEQG AHETTSEQGL TCYDDHENEN FNAEFSSSNI SSSAVGLQQT GRDARENVHG DDSAGKMDLE
201: QQNAISGHSL GTAYEVVRAP KRIIEKDSRL RYAPKIVPKS VKTSSDSPLD RTSVSKRPDS LKLGMSINQK AKTDNDRLLR GPNVAPHKMS GSTERNKLTT
301: KQTGVRRPSS ASSQRPSVGE RHRIARESIK KPADVSTPRR PSTAERHPVT TERARKQADV DTPRRPSTSE RRAVNKGSAD MTTTHRPSTG ERRSVTRESV
401: LKMDVRTPSK TRPTMTQLKG ATTTVGIVKK AGTPNASKSI NMGTKSNIRE LEGPSKVGRH SVGSKITDLQ IAGKQKSSSV HLPPRKLLSS SIGEPALQTF
501: TRPKKKDVAA QSRASTSKRA MTLHTGNVKG RSSNPPPPPP PPRRPSRTTN RPNGSNSSTV GQKPKVSSAP KWH
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.