Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G087000.1 | Wheat | nucleus | 27.68 | 22.98 |
| OQU79091 | Sorghum | nucleus | 22.69 | 22.03 |
| TraesCS2A01G089100.1 | Wheat | nucleus | 17.96 | 21.82 |
| Zm00001d023630_P005 | Maize | nucleus | 25.19 | 21.67 |
| TraesCS2B01G104800.2 | Wheat | nucleus | 24.94 | 20.7 |
| HORVU2Hr1G014550.1 | Barley | cytosol | 22.94 | 16.76 |
| Solyc02g093720.2.1 | Tomato | nucleus | 15.96 | 12.77 |
| KRG99221 | Soybean | nucleus | 13.97 | 11.74 |
| Solyc02g067950.2.1 | Tomato | extracellular | 14.21 | 11.49 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 10.47 | 11.38 |
| PGSC0003DMT400032926 | Potato | nucleus | 14.46 | 11.35 |
| KRG99370 | Soybean | nucleus | 6.48 | 10.74 |
| KRH45764 | Soybean | nucleus | 12.72 | 10.58 |
| PGSC0003DMT400017939 | Potato | nucleus | 12.97 | 10.48 |
| Bra036350.1-P | Field mustard | nucleus | 14.46 | 10.41 |
| KRH57609 | Soybean | nucleus | 15.71 | 10.13 |
| KRH07049 | Soybean | nucleus | 11.72 | 9.42 |
| KRH74704 | Soybean | nucleus | 12.72 | 9.39 |
| AT3G26050.1 | Thale cress | nucleus | 12.22 | 9.19 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 9.48 | 9.16 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.72 | 9.14 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.47 | 9.06 |
| CDX99732 | Canola | nucleus | 11.97 | 8.99 |
| KRH69438 | Soybean | nucleus | 11.22 | 8.96 |
| KRH33693 | Soybean | nucleus | 4.74 | 8.92 |
| CDY40987 | Canola | nucleus | 12.72 | 8.87 |
| KRH16191 | Soybean | nucleus | 7.98 | 8.65 |
| KRG97481 | Soybean | nucleus | 13.97 | 8.56 |
| Os01t0885300-01 | Rice | nucleus | 12.22 | 8.55 |
| Os02t0558600-01 | Rice | nucleus | 12.47 | 8.43 |
| PGSC0003DMT400004849 | Potato | nucleus | 9.23 | 8.22 |
| KRG94005 | Soybean | nucleus | 13.22 | 8.05 |
| KRH31410 | Soybean | nucleus | 11.97 | 7.77 |
| PGSC0003DMT400031254 | Potato | nucleus | 11.22 | 6.98 |
| Os05t0420500-01 | Rice | nucleus | 11.22 | 6.33 |
| Solyc05g014270.2.1 | Tomato | nucleus | 10.47 | 6.31 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.74 | 5.08 |
Protein Annotations
| EnsemblPlants:Os12t0273700-01 | EnsemblPlantsGene:Os12g0273700 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF27 | ProteinID:BAT16660.1 | SEG:seg |
| UniParc:UPI000393B826 | UniProt:A0A0P0Y904 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os12t0273700-01)
Coordinates
chr12:+:10049330..10053017
Molecular Weight (calculated)
42802.1 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.899
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: EAAHQSRPGS VAQKKAFFEA HYARKRKTDA DADATGSDVD PDEDAAAAVS SARSSSSSCM TDEPAAEETT SCVVGSGVVA AGPVEEMEEL DVIADGGVGS
101: SCGVDADGAA HHKQDGVHAG ESREVLQAME KQEAATPDPC ADNSVPADAD DKQPLKESSI VNQGSAESVK RRRLPSLLQK PAKFSSPSSG SKGPTSSAKR
201: RSRLHSAKEN SSPPNNESDQ QATSSVPQNR SILEAFQKSK NFGRCETGNA ASSSKNLGTT IAARISQLES ATGPVKHTDS ALSQVKPPIE AFPKDVPEIT
301: SRTSQLEEQR SSHVTRVKEK LFGFTSQSAH QKANTPRKEK GKTQNESFKA RPLPNFYRRN KQAKDSIHQS SQDVNNSHAH PTNKEASKDK QICCFPLRRL
401: G
101: SCGVDADGAA HHKQDGVHAG ESREVLQAME KQEAATPDPC ADNSVPADAD DKQPLKESSI VNQGSAESVK RRRLPSLLQK PAKFSSPSSG SKGPTSSAKR
201: RSRLHSAKEN SSPPNNESDQ QATSSVPQNR SILEAFQKSK NFGRCETGNA ASSSKNLGTT IAARISQLES ATGPVKHTDS ALSQVKPPIE AFPKDVPEIT
301: SRTSQLEEQR SSHVTRVKEK LFGFTSQSAH QKANTPRKEK GKTQNESFKA RPLPNFYRRN KQAKDSIHQS SQDVNNSHAH PTNKEASKDK QICCFPLRRL
401: G
001: MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD
101: VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS
201: NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV LFESLLSVLL CNERTTPVS
101: VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS
201: NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIREWHRLCS IHTSLEKSPS AIGISFFCLV LFESLLSVLL CNERTTPVS
Arabidopsis Description
Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.