Factsheet for Os02t0558600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G159300.1	Wheat	nucleus	44.52	47.74
TraesCS6D01G153200.1	Wheat	nucleus	43.84	47.02
EES06976	Sorghum	nucleus	41.65	46.87
TraesCS6B01G192000.1	Wheat	nucleus	43.17	46.29
Zm00001d024922_P001	Maize	nucleus	7.76	45.1
HORVU6Hr1G033310.33	Barley	cytosol	41.65	41.24
Zm00001d016849_P002	Maize	nucleus	38.11	40.57
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	8.43	24.15
GSMUA_Achr6P24150_001	Banana	nucleus	16.86	22.08
Os01t0885300-01	Rice	nucleus	19.06	19.72
KRH33693	Soybean	nucleus	6.41	17.84
KRG99370	Soybean	nucleus	7.25	17.77
VIT_18s0001g05830.t01	Wine grape	nucleus	14.84	16.86
KRH16191	Soybean	nucleus	9.95	15.95
KRH07049	Soybean	nucleus	11.97	14.23
Os05t0420500-01	Rice	nucleus	17.03	14.21
PGSC0003DMT400004849	Potato	nucleus	10.62	14.0
KRH69438	Soybean	nucleus	11.64	13.74
PGSC0003DMT400017939	Potato	nucleus	11.3	13.51
PGSC0003DMT400032926	Potato	nucleus	11.64	13.5
PGSC0003DMT400031254	Potato	nucleus	14.67	13.49
Solyc02g093720.2.1	Tomato	nucleus	11.13	13.17
Solyc02g067950.2.1	Tomato	extracellular	10.96	13.1
Solyc05g006490.2.1	Tomato	nucleus	13.15	12.96
KRG99221	Soybean	nucleus	10.29	12.79
KRH45764	Soybean	nucleus	10.29	12.66
Os12t0273700-01	Rice	nucleus	8.43	12.47
PGSC0003DMT400058225	Potato	nucleus	12.48	12.42
Solyc05g014270.2.1	Tomato	nucleus	12.82	11.41
KRH57609	Soybean	nucleus	11.64	11.09
KRH74704	Soybean	nucleus	10.12	11.05
KRG94005	Soybean	nucleus	11.97	10.79
KRG97481	Soybean	nucleus	11.8	10.7
Solyc04g005060.2.1	Tomato	nucleus	6.41	10.16
KRH31410	Soybean	nucleus	10.12	9.71

Protein Annotations

EMBL:AK063457	EnsemblPlants:Os02t0558600-01	EnsemblPlantsGene:Os02g0558600	EntrezGene:4329682	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR31358	PANTHER:PTHR31358:SF5	ProteinID:BAD16429.1	ProteinID:BAF09060.1	ProteinID:BAS79239.1
RefSeq:XP_015624662.1	RefSeq:XP_015624663.1	RefSeq:XP_015624664.1	SEG:seg	UniParc:UPI0000358D40	UniProt:Q6YVX1
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os02t0558600-01)

Coordinates

chr2:-:21174988..21180171

Molecular Weight (calculated)

65385.1 Da

IEP (calculated)

10.548

GRAVY (calculated)

-0.868

Length

593 amino acids

Sequence
(BLAST)

001: MAAEVGQRFC SGWSYSDVPY NDHHAQTDAS VQQMVLDHGS VSFGRFAAES LSWEKRSVFD HNRRQEELSN LTMPGLVAQK KAFFEEYYKR ARLLKAQEEV
101: NQTEATSEEG TDHYDANGHN IHEHKLPAVS SEDPVASAPS SSFEPSTGVS SSGEKKCQDP HGLGYLTFNP LFSQITGSQN IQLEGPVSDQ MHHAEGDFPC
201: ATHTNTRDVL NHEPLERKVL APKHIVSNDN GENVAVSRIA LPIASLQREH LKIDLERQEP RKNALISSMP TKSSKEPSTS VIHIPRIDSI RNSENRNSLE
301: LKDPFHKRVE MKLRALSDRM NADKATASSR SVFHQHAERA VTSSRSSMTS CRSSTYQNGD RVATSSRSAL GQNADRVHAS SKSAQQASRR SLREPHGAVS
401: LPRAAVNKGS HVSHVALSNS TTQKFVTSHP KHSVMPNSSQ RASTLHTTQV SLKRSAGVSS VNNRPQNKRK QLSTPSTWDE NKLNRGYART SAPSSARSSS
501: VGILPYKTAK APKISNGNNV VVKQTEMMQK SRNGSHPAGG RNVQPKNVVS CNEQKRKVTP FQASSLSSST RNNQASGPSM SKSKPRQERP RWR

Best Arabidopsis Sequence Match ( AT3G26050.1 )
(BLAST)

001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN

Arabidopsis Description

TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.