Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 36.27 | 17.87 |
| KRH33693 | Soybean | nucleus | 20.59 | 9.86 |
| Zm00001d016849_P002 | Maize | nucleus | 50.0 | 9.16 |
| EES06976 | Sorghum | nucleus | 47.06 | 9.11 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 40.2 | 9.05 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 44.12 | 8.62 |
| Os02t0558600-01 | Rice | nucleus | 45.1 | 7.76 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 41.18 | 7.59 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 40.2 | 7.41 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 40.2 | 7.41 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 38.24 | 6.51 |
| Solyc02g067950.2.1 | Tomato | extracellular | 31.37 | 6.45 |
| PGSC0003DMT400032926 | Potato | nucleus | 31.37 | 6.26 |
| KRH45764 | Soybean | nucleus | 29.41 | 6.22 |
| KRH07049 | Soybean | nucleus | 30.39 | 6.21 |
| Solyc02g093720.2.1 | Tomato | nucleus | 30.39 | 6.19 |
| KRG99221 | Soybean | nucleus | 28.43 | 6.08 |
| KRG99370 | Soybean | nucleus | 13.73 | 5.79 |
| Solyc05g006490.2.1 | Tomato | nucleus | 32.35 | 5.48 |
| PGSC0003DMT400017939 | Potato | nucleus | 26.47 | 5.44 |
| Zm00001d042598_P003 | Maize | mitochondrion | 34.31 | 5.44 |
| KRH16191 | Soybean | nucleus | 19.61 | 5.41 |
| Zm00001d023630_P005 | Maize | nucleus | 24.51 | 5.36 |
| PGSC0003DMT400004849 | Potato | nucleus | 23.53 | 5.33 |
| KRH57609 | Soybean | nucleus | 30.39 | 4.98 |
| KRH69438 | Soybean | nucleus | 24.51 | 4.98 |
| PGSC0003DMT400058225 | Potato | nucleus | 28.43 | 4.87 |
| KRH74704 | Soybean | nucleus | 25.49 | 4.79 |
| KRH31410 | Soybean | nucleus | 28.43 | 4.69 |
| PGSC0003DMT400031254 | Potato | nucleus | 29.41 | 4.65 |
| KRG94005 | Soybean | nucleus | 29.41 | 4.56 |
| Zm00001d038217_P002 | Maize | nucleus | 32.35 | 4.38 |
| KRG97481 | Soybean | nucleus | 26.47 | 4.13 |
| Solyc05g014270.2.1 | Tomato | nucleus | 26.47 | 4.05 |
| Solyc04g005060.2.1 | Tomato | nucleus | 9.8 | 2.67 |
Protein Annotations
| EnsemblPlants:Zm00001d024922_P001 | EnsemblPlants:Zm00001d024922_T001 | EnsemblPlantsGene:Zm00001d024922 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | ProteinID:AQK42326.1 |
| UniParc:UPI0002213CE0 | UniProt:K7TJ19 | MapMan:35.2 | : | : | : |
Description
TPX2 (targeting protein for Xklp2) protein family
Coordinates
chr10:-:95178214..95178898
Molecular Weight (calculated)
11328.5 Da
IEP (calculated)
10.752
GRAVY (calculated)
-0.849
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLNHGSVSF GRSAAESLSW GKKALTKLRA PGLVTQKKAF FEEYYKRSRH LKAQERLHQT GATMEENNNN QADELPPAMS ADLVANAPQQ KRMVQGSGKS
101: NR
101: NR
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.