Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024922_P001 | Maize | nucleus | 9.11 | 47.06 |
| Zm00001d016849_P002 | Maize | nucleus | 45.35 | 42.91 |
| Os02t0558600-01 | Rice | nucleus | 46.87 | 41.65 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 40.23 | 38.34 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 40.23 | 38.34 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 39.85 | 37.97 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 38.71 | 34.06 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 9.49 | 24.15 |
| GSMUA_Achr6P24150_001 | Banana | nucleus | 18.79 | 21.85 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 18.79 | 18.97 |
| KRH33693 | Soybean | nucleus | 6.83 | 16.9 |
| EES03998 | Sorghum | nucleus | 17.46 | 16.23 |
| PGSC0003DMT400017939 | Potato | nucleus | 14.61 | 15.52 |
| Solyc02g067950.2.1 | Tomato | extracellular | 13.85 | 14.72 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.85 | 14.57 |
| PGSC0003DMT400004849 | Potato | nucleus | 12.33 | 14.44 |
| KRG99221 | Soybean | nucleus | 12.9 | 14.26 |
| PGSC0003DMT400032926 | Potato | nucleus | 13.66 | 14.09 |
| KRG99370 | Soybean | nucleus | 6.45 | 14.05 |
| KRH16191 | Soybean | nucleus | 9.68 | 13.78 |
| PGSC0003DMT400031254 | Potato | nucleus | 15.75 | 12.87 |
| KRH74704 | Soybean | nucleus | 13.09 | 12.71 |
| KRH45764 | Soybean | nucleus | 11.57 | 12.66 |
| KRH69438 | Soybean | nucleus | 11.95 | 12.55 |
| Solyc05g006490.2.1 | Tomato | nucleus | 14.04 | 12.29 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.85 | 12.25 |
| Solyc05g014270.2.1 | Tomato | nucleus | 15.18 | 12.01 |
| KRH07049 | Soybean | nucleus | 11.01 | 11.62 |
| OQU79091 | Sorghum | nucleus | 8.92 | 11.38 |
| KRH31410 | Soybean | nucleus | 13.09 | 11.16 |
| EES18249 | Sorghum | nucleus | 15.94 | 10.95 |
| KRG94005 | Soybean | nucleus | 13.28 | 10.64 |
| KRG97481 | Soybean | nucleus | 13.09 | 10.55 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.4 | 10.43 |
| KRH57609 | Soybean | nucleus | 11.95 | 10.13 |
Protein Annotations
| EnsemblPlants:EES06976 | EnsemblPlantsGene:SORBI_3004G179800 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | ProteinID:EES06976 | ProteinID:EES06976.2 |
| SEG:seg | UniParc:UPI0007F287A9 | UniProt:C5XUV6 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:-:53248036..53253382
Molecular Weight (calculated)
57860.8 Da
IEP (calculated)
10.687
GRAVY (calculated)
-0.848
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADVGLRFN GWSYSDLPYN EHNAQDSSVQ EMVLNHGSVS FGRFAAESLS WEKRSVFEHN RRKEELSKLT APGLVAQKKA FFEEYYKRAR HLKAQGGLHQ
101: TGATMEENGD STLGNSSQAD EAAMSEDPVS CAPSSTSFEP STEVGSSNES KCQDAHDLGY LTFNPLFSQT SCLPNIQEEK SSPGQKLGSR IVLASLQSEY
201: LKVDPEKSGA SKNVPIINRS RKVSKDLPTS VINIPRVDLR RNSENRPSRD FKDPFHKRVE MKLRALSDRM DADRTAASTR SASYQPPERA MTSSRSAYQD
301: RPAMSSRSSA CQNTSRAPCK LAAQASHKYL KVVKGSDAKP HGIYVNKGSS ASLVASRNST ATGKSPAKIL VVPSSSQASA KTSRTAQVTS KRTAVPTSVN
401: NVSQNKRKHT LVALDEKYPK REYVRRSAPP SARSSSENLP RAAKAPKISN VTNPVSKTEV VQNSRSSSNL IGGRNMLTKR SANCNEENRK VIRSHTGDLA
501: KPSMRSNLKG GPSLTKNKPR QERPRWR
101: TGATMEENGD STLGNSSQAD EAAMSEDPVS CAPSSTSFEP STEVGSSNES KCQDAHDLGY LTFNPLFSQT SCLPNIQEEK SSPGQKLGSR IVLASLQSEY
201: LKVDPEKSGA SKNVPIINRS RKVSKDLPTS VINIPRVDLR RNSENRPSRD FKDPFHKRVE MKLRALSDRM DADRTAASTR SASYQPPERA MTSSRSAYQD
301: RPAMSSRSSA CQNTSRAPCK LAAQASHKYL KVVKGSDAKP HGIYVNKGSS ASLVASRNST ATGKSPAKIL VVPSSSQASA KTSRTAQVTS KRTAVPTSVN
401: NVSQNKRKHT LVALDEKYPK REYVRRSAPP SARSSSENLP RAAKAPKISN VTNPVSKTEV VQNSRSSSNL IGGRNMLTKR SANCNEENRK VIRSHTGDLA
501: KPSMRSNLKG GPSLTKNKPR QERPRWR
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.