CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31410	Soybean	nucleus	42.97	45.47
KRH25750	Soybean	cytosol	6.42	41.18
Zm00001d024922_P001	Maize	nucleus	4.13	26.47
HORVU2Hr1G014490.1	Barley	plastid	5.5	19.67
KRH45764	Soybean	nucleus	14.22	19.29
KRG99370	Soybean	nucleus	7.03	19.01
KRH57609	Soybean	nucleus	18.04	18.97
KRH07049	Soybean	nucleus	14.22	18.64
KRG94005	Soybean	nucleus	18.65	18.54
KRH33693	Soybean	nucleus	5.96	18.31
KRG99221	Soybean	nucleus	13.3	18.24
KRH16191	Soybean	nucleus	9.48	16.76
KRH74704	Soybean	nucleus	13.76	16.57
VIT_07s0005g05560.t01	Wine grape	mitochondrion, plastid	2.14	16.47
KRH69438	Soybean	nucleus	12.54	16.33
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	4.59	14.49
TraesCS2D01G087000.1	Wheat	nucleus	10.7	14.49
GSMUA_Achr6P03270_001	Banana	nucleus	9.02	14.22
TraesCS2B01G104800.2	Wheat	nucleus	10.4	14.08
Zm00001d016849_P002	Maize	nucleus	11.93	14.0
Os12t0273700-01	Rice	nucleus	8.56	13.97
OQU79091	Sorghum	nucleus	8.72	13.8
Zm00001d023630_P005	Maize	nucleus	9.79	13.73
GSMUA_Achr6P24150_001	Banana	nucleus	9.48	13.69
CDY38790	Canola	nucleus	2.91	13.67
Os01t0885300-01	Rice	nucleus	11.93	13.61
TraesCS3A01G404700.2	Wheat	nucleus	11.93	13.61
EES03998	Sorghum	nucleus	11.62	13.4
KRH50366	Soybean	nucleus	12.54	13.4
TraesCS3B01G438400.1	Wheat	nucleus	11.62	13.31
GSMUA_Achr7P23570_001	Banana	nucleus	10.86	13.3
EES06976	Sorghum	nucleus	10.55	13.09
KRG89293	Soybean	nucleus	12.54	12.85
TraesCS2A01G089100.1	Wheat	nucleus	6.42	12.73
GSMUA_Achr6P18450_001	Banana	nucleus	10.24	12.71
TraesCS3D01G400000.1	Wheat	nucleus	11.01	12.61
TraesCS6A01G159300.1	Wheat	nucleus	10.55	12.48
TraesCS6D01G153200.1	Wheat	nucleus	10.4	12.3
TraesCS6B01G192000.1	Wheat	nucleus	10.4	12.3
CDY46409	Canola	nucleus	4.89	12.17
Os02t0558600-01	Rice	nucleus	10.7	11.8
Zm00001d042598_P003	Maize	mitochondrion	11.31	11.51
TraesCS1A01G263200.1	Wheat	nucleus	12.84	11.51
Os05t0420500-01	Rice	nucleus	12.08	11.11
TraesCS1D01G263300.1	Wheat	nucleus	12.39	11.08
HORVU1Hr1G063930.1	Barley	nucleus	12.23	10.96
EES18249	Sorghum	nucleus	12.84	10.95
TraesCS1B01G273800.1	Wheat	nucleus	12.08	10.81
Zm00001d038217_P002	Maize	nucleus	12.08	10.48
HORVU6Hr1G033310.33	Barley	cytosol	9.48	10.35
HORVU2Hr1G014550.1	Barley	cytosol	5.35	6.38

Protein Annotations

EMBL:ACUP02010799	EnsemblPlants:KRG97481	EnsemblPlantsGene:GLYMA_18G010600	EntrezGene:100799349	PANTHER:PTHR31358	PANTHER:PTHR31358:SF12
ProteinID:KRG97481	ProteinID:KRG97481.1	SEG:seg	UniParc:UPI0003DE8829	UniProt:A0A0R0EUC4	MapMan:35.2

Description

hypothetical protein

Coordinates

chr18:+:752789..757071

Molecular Weight (calculated)

70965.0 Da

IEP (calculated)

10.618

GRAVY (calculated)

-0.805

Length

654 amino acids

Sequence
(BLAST)

001: MDSFAKVLKI SIIQTHVVFV EDSNHAWVSM SLGNPIRALG ESISFGRFMT EGLDWEKWST FSHNRYVEEA EKYSKPGSVA AKKAYFEAHY KRAAAERAAA
101: LIPEANAQAN GTFEAQVHEG NCADSSFGTS SNVANVVAAN EQLDNETANY QVVECADTDQ HKCDAGQSHL DISNVKGAED VPHPRTDTDL NVESCTFVAN
201: SYSNQLHHVE DNTYIAVPAE EKTPDHGAVG QEVLTLSVKG REANSSPKLS TKTVVAKHSR SPDERKAAVL PRSGINSGPK GKKSVGDSVE KKRLIAQSVR
301: MSINLPSGTG ETRKRTATAS QSRNGTNNFS TSKKSVRGLV EKKRITAPSL RMSINLPSGA GMTSKTDTVA AKPRNGINFA AKSMKSVGNS VEKRPTKRSL
401: HMSINLPSGA GETSKTASVL EQNGIKKNHS NISKNNPGVL RTSTKVSHGL LNQASANPPS QGRRTERPLN KSVSGALTAN AKPSSSISFD CLKSSGPTKS
501: NPQSATISTP FRFRSEERAV KRKEFLQRMD ETKSKEEEKV KLQRTLKGKT EHDHKKLRQR SGSISKLNED KPGGSQSPSN QTRKISLTLP QSPKLGRKAS
601: SSSSTVQDRS LGNSWKPPIS TSKRTAEKNY RTAWRPVTSS SNTTRENASP NIQQ

Best Arabidopsis Sequence Match ( AT3G27350.1 )
(BLAST)

001: MGESAVLVHS YSFAAPITRN DSHEENTIHA LSQSISFGKF MTENLEWGKW SSFSHKKYVE EAEKYSRPGS VAQKKAFFEA HYKRIAEAKK AATEEQPSVT
101: PAEVLLHTLE TQPPPPPPPL VLKYGEEGRE RNSFQIDDHD VTDELENVMF GGDYVKEEEE KKVEEELLKE DWSVGEKEKQ HRKSVTKNRP VFRLSLEKTI
201: PPKSLDEISL TEKRSERPMT QVEEKPVHRQ RFGLLSCFIS NAKTQDQNQS RNKRKTEKKK QFLCLCLKPK TIRE

Arabidopsis Description

Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.