Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024922_P001 | Maize | nucleus | 9.05 | 40.2 |
| KRH33693 | Soybean | nucleus | 9.27 | 19.72 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 22.08 | 18.98 |
| EES06976 | Sorghum | nucleus | 21.85 | 18.79 |
| TraesCS6B01G192000.1 | Wheat | nucleus | 22.3 | 18.26 |
| TraesCS6A01G159300.1 | Wheat | nucleus | 22.3 | 18.26 |
| TraesCS6D01G153200.1 | Wheat | nucleus | 22.08 | 18.08 |
| HORVU6Hr1G033310.33 | Barley | cytosol | 22.52 | 17.03 |
| Os02t0558600-01 | Rice | nucleus | 22.08 | 16.86 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 19.87 | 16.85 |
| Zm00001d005523_P001 | Maize | cytosol, extracellular, plastid | 7.51 | 16.43 |
| Zm00001d016849_P002 | Maize | nucleus | 19.21 | 15.62 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 16.56 | 14.37 |
| Solyc02g067950.2.1 | Tomato | extracellular | 15.23 | 13.91 |
| KRH45764 | Soybean | nucleus | 14.79 | 13.9 |
| PGSC0003DMT400032926 | Potato | nucleus | 14.79 | 13.11 |
| KRH07049 | Soybean | nucleus | 14.35 | 13.03 |
| PGSC0003DMT400017939 | Potato | nucleus | 14.13 | 12.9 |
| Solyc02g093720.2.1 | Tomato | nucleus | 13.91 | 12.57 |
| KRG99221 | Soybean | nucleus | 13.02 | 12.37 |
| KRH16191 | Soybean | nucleus | 9.93 | 12.16 |
| KRG99370 | Soybean | nucleus | 6.4 | 11.98 |
| GSMUA_Achr6P03270_001 | Banana | nucleus | 10.6 | 11.57 |
| PGSC0003DMT400004849 | Potato | nucleus | 10.6 | 10.67 |
| Solyc05g006490.2.1 | Tomato | nucleus | 13.91 | 10.47 |
| PGSC0003DMT400058225 | Potato | nucleus | 13.69 | 10.4 |
| KRH69438 | Soybean | nucleus | 11.48 | 10.36 |
| Solyc05g014270.2.1 | Tomato | nucleus | 15.01 | 10.21 |
| KRH74704 | Soybean | nucleus | 12.14 | 10.13 |
| PGSC0003DMT400031254 | Potato | nucleus | 14.35 | 10.08 |
| Solyc04g005060.2.1 | Tomato | nucleus | 7.95 | 9.63 |
| KRG97481 | Soybean | nucleus | 13.69 | 9.48 |
| KRH31410 | Soybean | nucleus | 12.58 | 9.22 |
| KRH57609 | Soybean | nucleus | 12.58 | 9.16 |
| KRG94005 | Soybean | nucleus | 13.24 | 9.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P24150_001 | EnsemblPlants:GSMUA_Achr6T24150_001 | EnsemblPlantsGene:GSMUA_Achr6G24150_001 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF5 | UniParc:UPI000295D52D |
| UniProt:M0T9R1 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G24150_001]
Coordinates
chr6:+:24557425..24564316
Molecular Weight (calculated)
51453.7 Da
IEP (calculated)
7.066
GRAVY (calculated)
-1.024
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVDQACY GWSHQELSDH DAYQEVPVSQ VLDHGSVSFG RFAVETLSWE KKSIFTRNRR QEELEKYRTH GLVAQKKAYF EEYFKRIRAV KSMQENQQSE
101: ITEDYGDDAS ISSQSGEENK TTAELKYHGD QAANVGNDQP EDGPIGVGIL HGDLEKLSNG VAMEQTTHPI EALQTSPLSS STRSFKDNQE ENHYDYGDPE
201: KLSNGVAMEQ TTHPIEALQT SPLSSSTRSF KDNQEENHYD YALQMQHLNQ KLLKDEACIG SQQNIDQHDI SCLDEKWVSD GNVNLSYNHK TQIAASGIAA
301: FARRNPKPER SMLKQVENST RDKNLQNKNT YKKESMPTSK LKVCQLRNLF TMLSINLPRG NKTNRCSESE NQSYCVARGN RKEEGKDRAN LMSKIHRLSS
401: TNADSILITN PKEENRKIIK SQISNRSLHT SKSKSNDASL DAKKPRQVMP RWR
101: ITEDYGDDAS ISSQSGEENK TTAELKYHGD QAANVGNDQP EDGPIGVGIL HGDLEKLSNG VAMEQTTHPI EALQTSPLSS STRSFKDNQE ENHYDYGDPE
201: KLSNGVAMEQ TTHPIEALQT SPLSSSTRSF KDNQEENHYD YALQMQHLNQ KLLKDEACIG SQQNIDQHDI SCLDEKWVSD GNVNLSYNHK TQIAASGIAA
301: FARRNPKPER SMLKQVENST RDKNLQNKNT YKKESMPTSK LKVCQLRNLF TMLSINLPRG NKTNRCSESE NQSYCVARGN RKEEGKDRAN LMSKIHRLSS
401: TNADSILITN PKEENRKIIK SQISNRSLHT SKSKSNDASL DAKKPRQVMP RWR
001: MGESICLVRS FSQPSEFSSR EINEVVPNRV LTESVSFGRY ANETLAWARW SAFTQNRYLE EVERFTKPGS VAEKKAFFEA HFKNRASGKA ATQTKKIEQV
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
101: KVKDSVEIVC DIPKDILVDS EVPLAVNREV SSNEVDSVVP SISVIDETGK VENLKSVVVP DEGNSTSLSK ERPPSSSGSK VSSSKLESSV VIELDHSLKN
201: TKKESSSSST RSLSASKNRS RSPPEPIHMS ISCVSSSNTE KTIVGRPQNG SRSAVKADKK KRSGPSSVHM SLNFASSTLR TTKEAPKTLA RNSTTQGTTS
301: TNARNKLFPK INEPTGALKS CKRPLSQTSK DGSTNASAVT LPRLPLLSNL LSENKRKNIS VRSSVSCRIS NNEQRKPSVG CENLSTHSRT KAKSLTVSSP
401: FVFRSDERAE KRKEFFKKVE EKNKKEKEDK FSCGFKANQN TNLASEEHKN PQVGGFQVTP MTLTSPRFRR NQTPGKENIK KPHQTPHKAS SMKIINTKKV
501: VMEKHKSSKI HPSSKQQTTK RTQENMSPNI LQN
Arabidopsis Description
TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:Q84JG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.