CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99370	Soybean	nucleus	24.1	50.0
KRH74704	Soybean	nucleus	52.19	48.25
KRH16191	Soybean	nucleus	32.07	43.51
KRH25750	Soybean	cytosol	8.37	41.18
CDY46410	Canola	cytosol	13.35	41.1
KRH45764	Soybean	nucleus	38.65	40.25
KRG99221	Soybean	nucleus	36.06	37.95
VIT_01s0026g00960.t01	Wine grape	nucleus	32.27	31.58
CDY14672	Canola	nucleus	28.88	29.23
Bra024641.1-P	Field mustard	nucleus	29.28	29.11
CDY16238	Canola	nucleus	29.28	29.05
CDY11620	Canola	nucleus	28.09	28.78
KRH33693	Soybean	nucleus	12.15	28.64
AT1G70100.3	Thale cress	nucleus	27.69	27.58
Bra016318.1-P	Field mustard	nucleus	26.69	27.46
Bra016236.1-P	Field mustard	nucleus	26.1	27.18
PGSC0003DMT400004849	Potato	nucleus	24.3	27.11
CDY38789	Canola	nucleus	15.74	26.51
AT1G24160.1	Thale cress	nucleus	28.49	26.48
Zm00001d024922_P001	Maize	nucleus	4.98	24.51
Solyc04g005060.2.1	Tomato	nucleus	15.14	20.32
KRH07049	Soybean	nucleus	16.53	16.63
Zm00001d005523_P001	Maize	cytosol, extracellular, plastid	6.77	16.43
HORVU2Hr1G014490.1	Barley	plastid	5.78	15.85
TraesCS2B01G104800.2	Wheat	nucleus	14.94	15.53
Solyc05g006490.2.1	Tomato	nucleus	18.33	15.28
OQU79091	Sorghum	nucleus	12.35	15.01
GSMUA_Achr6P03270_001	Banana	nucleus	12.35	14.94
KRH57609	Soybean	nucleus	17.93	14.47
PGSC0003DMT400058225	Potato	nucleus	16.93	14.26
KRG94005	Soybean	nucleus	18.33	13.98
KRH50366	Soybean	nucleus	16.93	13.89
TraesCS3D01G400000.1	Wheat	nucleus	15.74	13.84
TraesCS2D01G087000.1	Wheat	nucleus	13.15	13.66
TraesCS3B01G438400.1	Wheat	nucleus	15.54	13.66
Os01t0885300-01	Rice	nucleus	15.34	13.44
TraesCS3A01G404700.2	Wheat	nucleus	15.14	13.26
KRG89293	Soybean	nucleus	16.73	13.17
GSMUA_Achr6P18450_001	Banana	nucleus	13.74	13.09
Zm00001d023630_P005	Maize	nucleus	12.15	13.09
GSMUA_Achr7P23570_001	Banana	nucleus	13.74	12.92
TraesCS6D01G153200.1	Wheat	nucleus	14.14	12.84
Zm00001d016849_P002	Maize	nucleus	14.14	12.75
TraesCS6A01G159300.1	Wheat	nucleus	13.94	12.66
KRG97481	Soybean	nucleus	16.33	12.54
TraesCS6B01G192000.1	Wheat	nucleus	13.55	12.3
TraesCS2A01G089100.1	Wheat	nucleus	7.97	12.12
EES03998	Sorghum	nucleus	13.55	11.99
EES06976	Sorghum	nucleus	12.55	11.95
Os02t0558600-01	Rice	nucleus	13.74	11.64
GSMUA_Achr6P24150_001	Banana	nucleus	10.36	11.48
HORVU6Hr1G033310.33	Barley	cytosol	13.55	11.35
Os12t0273700-01	Rice	nucleus	8.96	11.22
KRH31410	Soybean	nucleus	13.55	11.0
Zm00001d042598_P003	Maize	mitochondrion	13.94	10.89
Os05t0420500-01	Rice	nucleus	12.75	9.0
HORVU1Hr1G063930.1	Barley	nucleus	12.95	8.9
EES18249	Sorghum	nucleus	13.55	8.87
TraesCS1A01G263200.1	Wheat	nucleus	12.55	8.63
TraesCS1D01G263300.1	Wheat	nucleus	12.55	8.62
TraesCS1B01G273800.1	Wheat	nucleus	12.55	8.62
Zm00001d038217_P002	Maize	nucleus	12.75	8.49
HORVU2Hr1G014550.1	Barley	cytosol	6.57	6.01

Protein Annotations

EMBL:ACUP02000709	EnsemblPlants:KRH69438	EnsemblPlantsGene:GLYMA_02G027100	EntrezGene:100781467	ncoils:Coil	PANTHER:PTHR31358
PANTHER:PTHR31358:SF17	ProteinID:KRH69438	ProteinID:KRH69438.1	ProteinID:KRH69439.1	ProteinID:KRH69440.1	SEG:seg
UniParc:UPI00029693F4	UniProt:K7K635	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2447419..2452843

Molecular Weight (calculated)

55452.0 Da

IEP (calculated)

9.966

GRAVY (calculated)

-0.922

Length

502 amino acids

Sequence
(BLAST)

001: MGEFLVDATV FEDKKMGEGG AASNPALQVS VSFGRFENDS LSWERWSSFS PNKYLEEVEK CATPGSVAQK KAYFEAHYKK VAARKAELLA QEKQREQDSF
101: GSQDHSGIDL SGNTGAEHDV SNNTQGSNEG VEQEASSVCE IHRTHVNESV EEVAVSRDYQ SSSVEVENKD YQSSSFEVEI KELESRSHSS YQIGEAEDVC
201: KKQEESPNIE AEDVKEISHV VYKETGKALE VEVKDVKLDH PKESKVKSVS KGSNAAKTKK KSMLLTSKAS PISAPSSKPA LTTPTKTVSP ASSTIKRISS
301: PSLSRRQIIS SGESRKFANK PLHMSLSLAP SNPDPARQST MRRSLIMERM GDKDIVKRAF KTFHNSFNQP KTSVEDKSLT KKQVPSRGTV PKVPTSTTLR
401: KENGRPTKVE NVDKSGNALR TTLGPKPDIR AEKGKESSRK IEEKSNAKGV ERTRLQLKLT VKEEKEAEMK RLKHNAKGTP SPAFYRGQKV VKSRSEKGDA
501: KT

Best Arabidopsis Sequence Match ( AT1G70100.4 )
(BLAST)

001: MVDMEVGIAS GEDKITTAAS SNQELQVSVS FGKFENDSLS WEKFSSFSPN KYLEEVEKCA TAGSVAQKKA YFESHYKKIA ERRADIIMEQ EKLLERNASF
101: RPNIQNRERT DDSDNDESMM IEFSTGYGSN GESTSEEDKL VTVIVTEVNE TCNHKPLEET MDFKECRSSV DTGDDLSTLK LEEKLEEIVQ VEDKEKVEEV
201: ICMKEEVKED VPSKDTGEMS ETLMKETKKE KDHNPIKKTD KNVRTNHMRA SPKSNQVTKK PVTSKVVSGR KTQPSKEKSM TKATNKAASP VLKPPGFSTP
301: RVSKSASTIS SMSTSRSSVK KESVSTLLRK KQTAPKSLPI SLNVDQSVSD PTAVPTTRKS LIMERMGDKD IVRRAFKSFQ KSFDQMKSTD DGQDTAPKQV
401: LAKATAVQRL GTTGQKNVRL AKSDGTERKG PNSHRSSSVV SKSNGTAEKQ KDPSRLGTRA VERIHLQAKP KKQAMSKLGG KV

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits to 2309 proteins in 344 species: Archae - 6; Bacteria - 672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses - 37; Other Eukaryot /.../83 (source: NCBI BLink). [Source:TAIR;Acc:AT1G70100]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.