Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G263200.1 | Wheat | nucleus | 45.99 | 44.79 |
| TraesCS1D01G263300.1 | Wheat | nucleus | 45.85 | 44.6 |
| HORVU1Hr1G063930.1 | Barley | nucleus | 45.15 | 43.97 |
| TraesCS1B01G273800.1 | Wheat | nucleus | 44.16 | 42.95 |
| EES18249 | Sorghum | nucleus | 37.97 | 35.2 |
| Zm00001d038217_P002 | Maize | nucleus | 35.44 | 33.42 |
| Os01t0885300-01 | Rice | nucleus | 26.86 | 33.33 |
| GSMUA_Achr7P23570_001 | Banana | nucleus | 16.17 | 21.54 |
| GSMUA_Achr6P18450_001 | Banana | nucleus | 15.05 | 20.3 |
| KRH33693 | Soybean | nucleus | 5.63 | 18.78 |
| Os02t0558600-01 | Rice | nucleus | 14.21 | 17.03 |
| KRG99370 | Soybean | nucleus | 5.49 | 16.12 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 11.67 | 15.9 |
| Solyc02g093720.2.1 | Tomato | nucleus | 10.97 | 15.57 |
| KRH16191 | Soybean | nucleus | 7.88 | 15.14 |
| Solyc02g067950.2.1 | Tomato | extracellular | 10.41 | 14.92 |
| PGSC0003DMT400032926 | Potato | nucleus | 10.69 | 14.87 |
| KRH07049 | Soybean | nucleus | 10.27 | 14.63 |
| KRH45764 | Soybean | nucleus | 9.56 | 14.11 |
| PGSC0003DMT400017939 | Potato | nucleus | 9.7 | 13.91 |
| KRG99221 | Soybean | nucleus | 9.28 | 13.84 |
| KRH69438 | Soybean | nucleus | 9.0 | 12.75 |
| KRH57609 | Soybean | nucleus | 10.97 | 12.54 |
| PGSC0003DMT400004849 | Potato | nucleus | 7.88 | 12.44 |
| PGSC0003DMT400058225 | Potato | nucleus | 10.41 | 12.42 |
| KRG94005 | Soybean | nucleus | 11.39 | 12.31 |
| Solyc05g006490.2.1 | Tomato | nucleus | 10.41 | 12.29 |
| KRG97481 | Soybean | nucleus | 11.11 | 12.08 |
| KRH31410 | Soybean | nucleus | 10.27 | 11.81 |
| KRH74704 | Soybean | nucleus | 9.0 | 11.79 |
| PGSC0003DMT400031254 | Potato | nucleus | 10.27 | 11.32 |
| Os12t0273700-01 | Rice | nucleus | 6.33 | 11.22 |
| Solyc05g014270.2.1 | Tomato | nucleus | 10.27 | 10.96 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.08 | 7.75 |
Protein Annotations
| EnsemblPlants:Os05t0420500-01 | EnsemblPlantsGene:Os05g0420500 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31358 |
| PANTHER:PTHR31358:SF7 | ProteinID:AAT44243.1 | ProteinID:AAV25651.1 | ProteinID:BAF17491.1 | ProteinID:BAS94073.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00003A925C | UniProt:Q6L4Z2 | MapMan:35.2 | : | : |
Description
Conserved hypothetical protein. (Os05t0420500-01)
Coordinates
chr5:+:20620923..20628290
Molecular Weight (calculated)
78831.0 Da
IEP (calculated)
10.774
GRAVY (calculated)
-0.716
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVTQNYF AWSQEESPVQ DSSQGTPQVF DHGSISFGRF ELESLAWEKW SVFANDRRHE EFGKFNGLVA KKKAYFEEYF KRIRELKALQ QQNQQTELNL
101: DYSGDGSDSS QTGEDVPTAD QASPSGSGTL LDSMVQTGVQ TIFENDLECY DDNDKEMLDK DISPSVGGTC QIEQEFRESA SGGNHPDRMV DVLQQNTNCG
201: PDDLGRPMES MMTPKRTVKK DSLVGQAAKT MPKTVNMTSS NIPGHAVVNK GTDSGKSSVV NRRAKPETIQ QRLKAVTGNI VDIVGRSKLV VKEVPGIMGV
301: RRPSSPALQR PSTRERRPVT RDSSRKAPEV ATMCRPSTAE RRPATRELAP KQANTVVPCR PSTPNRRPMT RELAPVHSSI ATPRRPSTAE RRPITRGMAP
401: MHPSIATPVR PSTAERRPTS KQMAQKHVGM ATPSRPSTAE RRPITREAAR KNADVAILHR PSTAERRPIT RETPQKHANV VALHRPSTAE RRPVVREIAP
501: KHADVTLTPA RRPSTSERRP VTRETALRHS NFTGSCWPLT PQRHISRGSA QIHADVSTTP RHPSTGERRP ITKESNIKLD EKTPIKLRGM LANPKGAMAT
601: VVTPQKAITQ KLVKSSKPEM KSCAKERTEL QAVGKHKASS VNLPPREMFT SNVRANRVPE SFRKPNKVTC PSLFFVPCCL SKLHSLSTVV TYAVLAPLAI
701: FIAVWRLLQL D
101: DYSGDGSDSS QTGEDVPTAD QASPSGSGTL LDSMVQTGVQ TIFENDLECY DDNDKEMLDK DISPSVGGTC QIEQEFRESA SGGNHPDRMV DVLQQNTNCG
201: PDDLGRPMES MMTPKRTVKK DSLVGQAAKT MPKTVNMTSS NIPGHAVVNK GTDSGKSSVV NRRAKPETIQ QRLKAVTGNI VDIVGRSKLV VKEVPGIMGV
301: RRPSSPALQR PSTRERRPVT RDSSRKAPEV ATMCRPSTAE RRPATRELAP KQANTVVPCR PSTPNRRPMT RELAPVHSSI ATPRRPSTAE RRPITRGMAP
401: MHPSIATPVR PSTAERRPTS KQMAQKHVGM ATPSRPSTAE RRPITREAAR KNADVAILHR PSTAERRPIT RETPQKHANV VALHRPSTAE RRPVVREIAP
501: KHADVTLTPA RRPSTSERRP VTRETALRHS NFTGSCWPLT PQRHISRGSA QIHADVSTTP RHPSTGERRP ITKESNIKLD EKTPIKLRGM LANPKGAMAT
601: VVTPQKAITQ KLVKSSKPEM KSCAKERTEL QAVGKHKASS VNLPPREMFT SNVRANRVPE SFRKPNKVTC PSLFFVPCCL SKLHSLSTVV TYAVLAPLAI
701: FIAVWRLLQL D
001: MGDMQVGVAT IDDKGFYGLM EDTQVKAVAS SNPSLQVSVS FGRFENDSLS WEKFSAFSPN KYLEEVGKCA TPGSVAQKKA YFEAHYKKIA ERKAEIIDQE
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
101: KLMDENASFR SIVSDQESVE CENGGVVVES EVDNGCNGQL SCDEDKHVTD ITAKVNQVSI DESNEETIVV KECQSSVDTV KDEVKDSVDS PVLEKAEEIA
201: LEEEKIEMVV HVQERSEEVL QEDEKEETEV REEVRDDISL QNDTVDANET TKKVVKKEKK PNLIKKNDGN VRINPTRGSL KPNQVGGKPE TNKTVTSRKT
301: PPSKEMKNMM KATKKPAAPM SKSPQGFATP RVYKPAPTKT SLSTSHSSLK KEKVSPLLSK KQTAPKSLHI SMNLDPPASD PTALPSTRKS LIMERMGDKD
401: IVKRAFKSFQ KSFDFKSSVD GLNTAVKQNP AKPTIIPSVA TRQKENGRPT KASSMEKRSG TTAYRSPSHG LKSNETAEKQ QKEISKSGAR PLEKTRLQKN
501: PKAGVIDAKT RRDSLNPKAK PVQGSLPMRT VSKSSLDKVL
Arabidopsis Description
F3I6.9 protein [Source:UniProtKB/TrEMBL;Acc:O48683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.