Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078339 | Potato | nucleus | 53.43 | 53.67 |
| AT1G70950.1 | Thale cress | nucleus | 18.39 | 26.36 |
| VIT_01s0011g04850.t01 | Wine grape | nucleus | 22.19 | 25.63 |
| CDX72762 | Canola | nucleus | 16.5 | 24.89 |
| Bra016172.1-P | Field mustard | nucleus | 16.5 | 23.49 |
| CDX96289 | Canola | nucleus | 16.35 | 23.09 |
| KRG89293 | Soybean | nucleus | 21.31 | 22.88 |
| KRH50366 | Soybean | nucleus | 19.71 | 22.06 |
| Solyc02g093720.2.1 | Tomato | nucleus | 12.12 | 16.57 |
| Solyc02g067950.2.1 | Tomato | extracellular | 11.97 | 16.53 |
| Solyc05g014270.2.1 | Tomato | nucleus | 14.01 | 14.41 |
| Solyc05g006490.2.1 | Tomato | nucleus | 11.24 | 12.79 |
| Solyc04g005060.2.1 | Tomato | nucleus | 4.96 | 9.09 |
Protein Annotations
| EnsemblPlants:Solyc05g008090.2.1 | EnsemblPlantsGene:Solyc05g008090.2 | InterPro:TPX2_C | ncoils:Coil | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF28 |
| PFAM:PF06886 | SEG:seg | UniParc:UPI0002766090 | UniProt:K4BWY3 | MapMan:20.1.5.2 | : |
Description
No Description!
Coordinates
chr5:+:2513534..2518326
Molecular Weight (calculated)
76346.8 Da
IEP (calculated)
8.763
GRAVY (calculated)
-1.054
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDIEEPFS HSFQADSWQS GSISFGRFEN ESLCWERRSS FTHNRYLEEV EKYSKPGSVT EKKAYFEARL RKKALLRQSS SEWQNGTESQ ASENDGNENT
101: SYEGDFERVN EIGHSAHFVE NHDRSASLLE NEKYQASETD VIENEGYAGD FEHVNEVDHS ARFDETTDRS IHLLKNGKYQ AENTGYDGDF ERVNEVGHST
201: RFEESFDGSH NGDIEVTECD GVDGIILHSG PQTELAATNS SDVLQSVPEH MEAEANFHLN AGNSAFDDDP KTEIEVKGKL EGQESSMEFS SNSVDLSSNA
301: HTTEKDGSVS SEPQRSSSSK VRTASQSRDT KARMLPQVSV ASGKGTISKQ AYKDMPSKPN RRHSDVSFTR RGEKPRLDAP GALLRSTARM QKPEVRSGSK
401: ANVINQQKST EQQPKARKAA ASRASSTEKV SHRVHQSVNR DKQSVNSCKP DMKQNGSGFL FKSEERAKKR KEFLMKLEEK MHAVEAEKHQ LQARTQVKKE
501: AELKQLRRNL NFKATPMPAF YHEPGRRSDG NKELASKTKS SKSQSRPSTS GARVTTVTEN TVPCSTSEHL IMADSPQVSE VTNHPSAELS DSSVPSSVRT
601: NKTSWQTRSN RTVAPKREQE KKQVLNSPRP RTADTIKGNK GFKAEEKTKV VARRSIGNNA MRKDIRSIDL SRSTRVGRLA VGVAS
101: SYEGDFERVN EIGHSAHFVE NHDRSASLLE NEKYQASETD VIENEGYAGD FEHVNEVDHS ARFDETTDRS IHLLKNGKYQ AENTGYDGDF ERVNEVGHST
201: RFEESFDGSH NGDIEVTECD GVDGIILHSG PQTELAATNS SDVLQSVPEH MEAEANFHLN AGNSAFDDDP KTEIEVKGKL EGQESSMEFS SNSVDLSSNA
301: HTTEKDGSVS SEPQRSSSSK VRTASQSRDT KARMLPQVSV ASGKGTISKQ AYKDMPSKPN RRHSDVSFTR RGEKPRLDAP GALLRSTARM QKPEVRSGSK
401: ANVINQQKST EQQPKARKAA ASRASSTEKV SHRVHQSVNR DKQSVNSCKP DMKQNGSGFL FKSEERAKKR KEFLMKLEEK MHAVEAEKHQ LQARTQVKKE
501: AELKQLRRNL NFKATPMPAF YHEPGRRSDG NKELASKTKS SKSQSRPSTS GARVTTVTEN TVPCSTSEHL IMADSPQVSE VTNHPSAELS DSSVPSSVRT
601: NKTSWQTRSN RTVAPKREQE KKQVLNSPRP RTADTIKGNK GFKAEEKTKV VARRSIGNNA MRKDIRSIDL SRSTRVGRLA VGVAS
001: MAGEIQDPFS LSFQGNSIHS GSISFGRFEK EGLSWEKRSS FSHNRYLEEV DKCSKPGSVT EMKAHFEAHF KKKGIRFPAS LESQTWGVHQ TSNEPDDEAV
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
Arabidopsis Description
WDL7Protein WVD2-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.