Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96289 | Canola | nucleus | 24.11 | 29.48 |
| CDX72762 | Canola | nucleus | 22.43 | 29.3 |
| Bra016172.1-P | Field mustard | nucleus | 23.1 | 28.48 |
| AT1G70950.1 | Thale cress | nucleus | 21.75 | 26.99 |
| VIT_01s0026g00960.t01 | Wine grape | nucleus | 19.39 | 22.42 |
| Solyc05g008090.2.1 | Tomato | nucleus | 25.63 | 22.19 |
| KRH50366 | Soybean | nucleus | 22.6 | 21.9 |
| KRG89293 | Soybean | nucleus | 22.26 | 20.69 |
| PGSC0003DMT400078339 | Potato | nucleus | 22.26 | 19.35 |
| VIT_14s0219g00090.t01 | Wine grape | nucleus | 15.85 | 16.58 |
| VIT_01s0010g02240.t01 | Wine grape | nucleus | 9.78 | 15.72 |
| VIT_18s0001g05830.t01 | Wine grape | nucleus | 11.47 | 13.03 |
| VIT_07s0005g05560.t01 | Wine grape | mitochondrion, plastid | 1.52 | 10.59 |
Protein Annotations
| EntrezGene:100245710 | EntrezGene:100853946 | wikigene:100853946 | MapMan:20.1.5.2 | ProteinID:CBI26910 | ProteinID:CBI26910.3 |
| ncoils:Coil | UniProt:D7T8T9 | EMBL:FN595752 | EntrezGene:LOC100853946 | wikigene:LOC100853946 | PFAM:PF06886 |
| PANTHER:PTHR31358 | PANTHER:PTHR31358:SF28 | TIGR:TC66739 | InterPro:TPX2_C | UniParc:UPI000198298E | ArrayExpress:VIT_01s0011g04850 |
| EnsemblPlantsGene:VIT_01s0011g04850 | EnsemblPlants:VIT_01s0011g04850.t01 | unigene:Vvi.7693 | RefSeq:XP_003631206 | RefSeq:XP_003631206.1 | RefSeq:XP_010657562.1 |
| RefSeq:XP_010657603.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:4447439..4454333
Molecular Weight (calculated)
66160.0 Da
IEP (calculated)
9.561
GRAVY (calculated)
-0.969
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEIEEPFS LNFQADSLHS GSISFGRFET ESLSWERRSS FSHNRYLEEV EKYSKPGSVT EKKAYFEAHF KKRALLSQSL SECQTGTEYQ TSENDVMENI
101: GYREDFEHEE GIHFANFDGS PGGSGHHGDC EVTECERQDT VISHSEFHVE LAFNNTNVVE DNVFKQVEPE ETRQTEAGCN KSLLVNAEPK IEVKQGLHGE
201: VLNVDELSKA INLSPNTQRT GKDDSTSFEC QLNASPKVRS TKESKPTKDR LKSQINGTQV QRNISNQASK DSAKIPSRRG RESPQRTKVE KLSAHTTIST
301: THSTCRTLKS EDSECSSKAK IIQENRSNER ELRTKKGIET QTSASEKVEP GGRQTSYRPK RNVNLSKADM KSNPAVFNFR SDERAERRKE FFMKLEKKMH
401: AKEAEMNQIQ AKTQEKTEAE IRQFRRSLNF KATPMPSFYH DSVSPAPDGN NAVSINKSTK RQIKSSSAGG RAAAGFPLYP NTGIDQVVSA SESVNTTNPP
501: QVTKAIIRTP SANRNRPHQA GVKNELAMKK EQEKDANGQK HRVSEVSKVT KGRVEGKHNA GAGRSSTGIV RKNMKDIGIT VSGMRHLAVG VAW
101: GYREDFEHEE GIHFANFDGS PGGSGHHGDC EVTECERQDT VISHSEFHVE LAFNNTNVVE DNVFKQVEPE ETRQTEAGCN KSLLVNAEPK IEVKQGLHGE
201: VLNVDELSKA INLSPNTQRT GKDDSTSFEC QLNASPKVRS TKESKPTKDR LKSQINGTQV QRNISNQASK DSAKIPSRRG RESPQRTKVE KLSAHTTIST
301: THSTCRTLKS EDSECSSKAK IIQENRSNER ELRTKKGIET QTSASEKVEP GGRQTSYRPK RNVNLSKADM KSNPAVFNFR SDERAERRKE FFMKLEKKMH
401: AKEAEMNQIQ AKTQEKTEAE IRQFRRSLNF KATPMPSFYH DSVSPAPDGN NAVSINKSTK RQIKSSSAGG RAAAGFPLYP NTGIDQVVSA SESVNTTNPP
501: QVTKAIIRTP SANRNRPHQA GVKNELAMKK EQEKDANGQK HRVSEVSKVT KGRVEGKHNA GAGRSSTGIV RKNMKDIGIT VSGMRHLAVG VAW
001: MAGEIQDPFS LSFQGNSIHS GSISFGRFEK EGLSWEKRSS FSHNRYLEEV DKCSKPGSVT EMKAHFEAHF KKKGIRFPAS LESQTWGVHQ TSNEPDDEAV
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
101: HATESFEDYR SDGSFSEDTS QSNSVCNYSH EQEKCGQGKS QCEFDEESDH CVSYDEILVN SDEVIELDEE EGGGDHGRVA DLVECENLGP PEMPQEIVIQ
201: DSALVEEAGS KLDEHASKKP SNSMETPSSS VNVKPIIPND VRVTKASTKG HDVTPKAASR RTKGSSLSSN SKTNVDAKSQ KELRPKKTIE SQPKSSNKTE
301: TRPPIATNRC KTSTTSSKLE MSTGSTSFRF KCSERAEKRK EFYMKLEEKI HAKKTETNQV QAKTQQKAEA EIKQFRKSLN FKATPMPSFY NIGTRPVSHN
401: KTEPSKVAQS RSRPATSASI TNRAVTRVSY KHGFEEAEMV KVMVSNRKQS AAKDSDLQKG NLMAVEMKQQ IGARRSRN
Arabidopsis Description
WDL7Protein WVD2-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.