Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99631 | Canola | cytosol | 24.09 | 50.34 |
| Bra025552.1-P | Field mustard | nucleus | 35.97 | 36.95 |
| Bra028471.1-P | Field mustard | nucleus | 36.96 | 36.72 |
| CDX67471 | Canola | nucleus | 36.96 | 36.72 |
| CDY11706 | Canola | nucleus | 36.96 | 36.72 |
| CDY42558 | Canola | nucleus | 33.66 | 34.81 |
| CDY36374 | Canola | nucleus | 36.96 | 33.33 |
| AT3G27350.2 | Thale cress | cytosol, nucleus, plastid | 31.02 | 29.47 |
| AT3G01710.3 | Thale cress | nucleus | 22.77 | 16.83 |
| CDY15926 | Canola | plastid | 13.53 | 16.53 |
| AT1G23060.1 | Thale cress | nucleus | 17.82 | 14.71 |
| AT1G70100.3 | Thale cress | nucleus | 20.79 | 12.5 |
| AT1G24160.1 | Thale cress | nucleus | 20.79 | 11.67 |
| PGSC0003DMT400031254 | Potato | nucleus | 23.76 | 11.16 |
| AT1G70950.1 | Thale cress | nucleus | 15.84 | 10.04 |
| AT3G26050.1 | Thale cress | nucleus | 17.16 | 9.76 |
| Solyc05g014270.2.1 | Tomato | nucleus | 20.46 | 9.31 |
Protein Annotations
| MapMan:35.2 | EntrezGene:834070 | ProteinID:AED94583.1 | ProteinID:AED94584.1 | ArrayExpress:AT5G40700 | EnsemblPlantsGene:AT5G40700 |
| RefSeq:AT5G40700 | TAIR:AT5G40700 | RefSeq:AT5G40700-TAIR-G | EnsemblPlants:AT5G40700.2 | TAIR:AT5G40700.2 | Unigene:At.30271 |
| ProteinID:BAB08542.1 | EMBL:BT020228 | EMBL:BT022061 | GO:GO:0008150 | RefSeq:NP_001031988.1 | RefSeq:NP_198886.2 |
| PO:PO:0000293 | PANTHER:PTHR31358 | PANTHER:PTHR31358:SF12 | UniProt:Q5PP69 | UniParc:UPI00001627EB | SEG:seg |
Description
At5g40700 [Source:UniProtKB/TrEMBL;Acc:Q5PP69]
Coordinates
chr5:-:16291812..16293602
Molecular Weight (calculated)
34061.9 Da
IEP (calculated)
5.527
GRAVY (calculated)
-0.802
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESAVLFHS YSFAAPPSRN ESHEDNTMHA LSQSVSFGRF MTENLEWGKW SSFSHKKYVD EAEKFSQPGS VAQKKAFFEA HYKKIAEAKK AKASDQSSDS
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKQRKTS KKPFLCLCFK PEMAGETEAG
301: RQR
101: DPKQEPESVA VLLNTLETLT KDEVKEEEGD ETELVLSSSE ELVLSIEKDD EPVRTNVAVL EQEDDLQVIH DDKEKDNHSE DGELVKKSCF VGEKEEERKS
201: VTKNSSVVRL SIEKSATSET PDKAMELVFS LKISGKPITH SSLTKSEKPV RPRFGFLSCL MGNTKTQDQK LTIKKQRKTS KKPFLCLCFK PEMAGETEAG
301: RQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.