Factsheet for Bra000994.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015186.1-P	Field mustard	nucleus	43.91	50.65
CDX74313	Canola	nucleus	53.26	47.0
AT3G01710.3	Thale cress	nucleus	42.49	36.59
Bra025270.1-P	Field mustard	nucleus	19.55	27.27
Bra025552.1-P	Field mustard	nucleus	20.68	24.75
Bra033005.1-P	Field mustard	nucleus	19.26	24.37
Bra028471.1-P	Field mustard	nucleus	19.83	22.95
Solyc02g067950.2.1	Tomato	extracellular	30.31	21.57
PGSC0003DMT400017939	Potato	nucleus	30.31	21.57
Solyc02g093720.2.1	Tomato	nucleus	29.75	20.96
PGSC0003DMT400032926	Potato	nucleus	30.03	20.74
KRH07049	Soybean	nucleus	27.48	19.44
VIT_14s0219g00090.t01	Wine grape	nucleus	31.16	19.4
KRH57609	Soybean	nucleus	30.31	17.2
Bra016318.1-P	Field mustard	nucleus	21.25	15.37
KRG94005	Soybean	nucleus	27.48	14.74
Bra016172.1-P	Field mustard	nucleus	19.83	14.55
Bra016236.1-P	Field mustard	nucleus	19.55	14.32
Bra024641.1-P	Field mustard	nucleus	19.55	13.66
Bra036350.1-P	Field mustard	nucleus	17.0	10.77
Bra012357.1-P	Field mustard	nucleus	7.65	8.26

Protein Annotations

EnsemblPlants:Bra000994.1	EnsemblPlants:Bra000994.1-P	EnsemblPlantsGene:Bra000994	InterPro:TPX2_C	ncoils:Coil	PANTHER:PTHR31358
PANTHER:PTHR31358:SF12	PFAM:PF06886	SEG:seg	UniParc:UPI00025407E2	UniProt:M4C9W5	MapMan:35.2

Description

AT3G01710 (E=2e-043) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 1029 Blast hits to 851 proteins in 111 species: Archae - 0; Bacteria - 24; Metazoa - 456; Fungi - 52; Plants - 192; Viruses - 7; Other Eukaryotes - 298 (source: NCBI BLink).

Coordinates

chrA03:+:14301925..14303833

Molecular Weight (calculated)

39799.3 Da

IEP (calculated)

10.482

GRAVY (calculated)

-1.075

Length

353 amino acids

Sequence
(BLAST)

001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSERLDW EKWSSFPTQN RYVAEADRYS RPGSVAQKKA FFEAHYKKLA AARKAAAEEA LLLRQQTSDE
101: LVPVQQEKDI NGVGKKESDP PVLEIPRASL DADMKVAAEK ESDPVLEIPR ASLDAEMKVV ARKVSRSGNR QSDEKENRGK DESKINGKGS TVKEEQQVEK
201: TPMIPKKKKS KEAQPKSSTK PRVSKLNISE RTPSKKPSNK SSSYNFTPAK EFNRLVSIIR KIDGSSRASS SKLQTKECKT PLRTPSSNNN KKLEEKFKAM
301: EAQKEKKEKE EERSVEKEES KLRQRLCFKA KPLPNFYKHR PKSTDQTKKA LLR

Best Arabidopsis Sequence Match ( AT3G01710.3 )
(BLAST)

001: MGESACLMQP FSYAAPQGDS LGALGQSVSF GRFMSEKLDW EKWSAFSTQN PYVAEAERYS KPGSVAQKKA FFEAHYKKVA AARKAAAEEA LLLQQQIPKP
101: QPEKSPVQEE DINEGEKKDW MVSKPDLEIP RGSLDVSAQL KLLAEKEGRF SNRQSDEKEN CGMAESEING RTAEEQVDEE KPILKSVKKK SKDSQPKSST
201: KPRVSKYNSS ERTPSKKSNN KSSSYTFTPA KEFNRLVSII RKIDGSRASS KPTKDCKTPL RTPSNKVSAK GMVEDSLSTP LSSNTRGKIA PNSSAKTGRG
301: RWNFLPAETP SCFTPFGLRT EERAERRKKK LEGKFKEMET QNQKAEERSV EKEESKLRQR LCFKAKPLPN FYKQRPKSTD QTKKVSLLSL IAKCMCEVLK
401: EKDSSHRFCV

Arabidopsis Description

TPX2 (Targeting protein for Xklp2) protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.