Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g00080.t01 | Wine grape | plasma membrane | 54.45 | 50.72 |
| KXG20452 | Sorghum | cytosol | 51.55 | 49.08 |
| Zm00001d036765_P003 | Maize | cytosol | 51.35 | 48.94 |
| Os06t0639100-02 | Rice | cytosol, peroxisome, plasma membrane | 51.26 | 48.71 |
| Zm00001d046624_P005 | Maize | cytosol | 51.64 | 48.5 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 51.16 | 48.13 |
| TraesCS7A01G524600.2 | Wheat | cytosol | 51.06 | 48.04 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 50.87 | 45.94 |
| TraesCS7D01G513500.2 | Wheat | cytosol | 51.06 | 45.64 |
| GSMUA_Achr3P13170_001 | Banana | plasma membrane | 40.23 | 42.28 |
Protein Annotations
| EntrezGene:100252430 | wikigene:100252430 | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | ProteinID:CBI21388 | ProteinID:CBI21388.3 |
| UniProt:D7SVT9 | EMBL:FN595233 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0008299 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010025 | GO:GO:0010143 |
| GO:GO:0010345 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019748 |
| GO:GO:0030176 | GO:GO:0030433 | GO:GO:0042335 | GO:GO:0046872 | GO:GO:1900490 | GO:GO:1904264 |
| InterPro:IPR011016 | InterPro:IPR013083 | EntrezGene:LOC100252430 | wikigene:LOC100252430 | PFAM:PF12906 | PFscan:PS51292 |
| PANTHER:PTHR13145 | SMART:SM00744 | SUPFAM:SSF57850 | TIGR:TC66936 | TMHMM:TMhelix | UniParc:UPI00015CA08E |
| ArrayExpress:VIT_07s0031g00230 | EnsemblPlantsGene:VIT_07s0031g00230 | EnsemblPlants:VIT_07s0031g00230.t01 | unigene:Vvi.11851 | RefSeq:XP_002278365 | RefSeq:XP_002278365.1 |
| InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:-:16448327..16459433
Molecular Weight (calculated)
117229.0 Da
IEP (calculated)
7.118
GRAVY (calculated)
0.397
Length
1034 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEIAGPPLAS DSEDRNEEDE DVCRICRNSG DSDNPLYYPC ACRGSIKFVH EDCLLQWLDR SKTRRCEVCR HMFLFSPIYA EDAPARLPLR EFITVITFKV
0101: FDVLQIFLHS AFSFSVYFLL ISFGTYWIWQ LAFVRSLSEA QKLFSSHIST KTIAINCFHG YLLSGIIKFV FHGFTFLRDF FIHLWDLRRQ NLEGENGGRD
0201: GVHAARRPPD NADRDFVGGG EGIAGAGQIG RRNAENVAAW LEVLAAQLED HVGRMFGRPN GVGIIEFFPF DMLVRIQVPV FRLLENSFSV LFRNTIFLIV
0301: VIFIPLSLGR VFSLHLLWLF SSATIPALSS VIPPTQTHAL ANNALGADAN SSLESRRDDM QNQVTAVVAG MLKEDSTGLE DVSNIISKTL SANLFKGEII
0401: RTSHLSNEMT LAIGYMFILL FFLFCLGPLF LIHYSRGQRL NWGRLFHIAY IAEAVLSIIR KFCAVLRHFM TMAKVAFILV IKFGFFPLIC GCWLDICTLR
0501: VFGKTIVQRV AFFLEDPAAS SFYHWIAGIL YMLQFSFSMN LLQGVLHNGV LNFLQNLADP IYILFHSLVE DPVHKHAGNI LLAVGIHGSL VVMLFFLPVR
0601: LAVLFVPSLF PLDLSLSDPL TTRFLFHICI PWATRYFKLR ATVKTLLCQW FTVVGRELDL TDVLLPRPEG NGMEENADVE PEQQQGQHDR QLHEEVGQRN
0701: RDLGALASAE DSNLGIWASG NSDVEEKNGD EQADSEYHLF LRILLLLVLA WITLLLSNLV LIVVPISLGR ALFNAIPLLP LTRGIKFPLF SVTLDIKFND
0801: IYAFILGNCI IRTVVTGSRY VVQHVQTGRA GVLLKQIWKW CGIALKSSAL LSIWIFVIPV LIGLLFELVV VTPIRVPLDE SPVFILYEDW LLGLIFLKFW
0901: TSLVLLDDEE LFVDRSWRVK FERVLNDGFS QLQGLWVMSE IIIPIMMKLL TALCVPYMFS RGLFPMLGYP LLVNSAVHRF AWVGCLASIF MCSCAKRIHA
1001: LFIRMHNAIW NERYLIGQRL HNFKEVSGRD AKQG
0101: FDVLQIFLHS AFSFSVYFLL ISFGTYWIWQ LAFVRSLSEA QKLFSSHIST KTIAINCFHG YLLSGIIKFV FHGFTFLRDF FIHLWDLRRQ NLEGENGGRD
0201: GVHAARRPPD NADRDFVGGG EGIAGAGQIG RRNAENVAAW LEVLAAQLED HVGRMFGRPN GVGIIEFFPF DMLVRIQVPV FRLLENSFSV LFRNTIFLIV
0301: VIFIPLSLGR VFSLHLLWLF SSATIPALSS VIPPTQTHAL ANNALGADAN SSLESRRDDM QNQVTAVVAG MLKEDSTGLE DVSNIISKTL SANLFKGEII
0401: RTSHLSNEMT LAIGYMFILL FFLFCLGPLF LIHYSRGQRL NWGRLFHIAY IAEAVLSIIR KFCAVLRHFM TMAKVAFILV IKFGFFPLIC GCWLDICTLR
0501: VFGKTIVQRV AFFLEDPAAS SFYHWIAGIL YMLQFSFSMN LLQGVLHNGV LNFLQNLADP IYILFHSLVE DPVHKHAGNI LLAVGIHGSL VVMLFFLPVR
0601: LAVLFVPSLF PLDLSLSDPL TTRFLFHICI PWATRYFKLR ATVKTLLCQW FTVVGRELDL TDVLLPRPEG NGMEENADVE PEQQQGQHDR QLHEEVGQRN
0701: RDLGALASAE DSNLGIWASG NSDVEEKNGD EQADSEYHLF LRILLLLVLA WITLLLSNLV LIVVPISLGR ALFNAIPLLP LTRGIKFPLF SVTLDIKFND
0801: IYAFILGNCI IRTVVTGSRY VVQHVQTGRA GVLLKQIWKW CGIALKSSAL LSIWIFVIPV LIGLLFELVV VTPIRVPLDE SPVFILYEDW LLGLIFLKFW
0901: TSLVLLDDEE LFVDRSWRVK FERVLNDGFS QLQGLWVMSE IIIPIMMKLL TALCVPYMFS RGLFPMLGYP LLVNSAVHRF AWVGCLASIF MCSCAKRIHA
1001: LFIRMHNAIW NERYLIGQRL HNFKEVSGRD AKQG
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.