Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49195 | Soybean | cytosol | 74.26 | 66.96 |
| VIT_09s0002g04280.t01 | Wine grape | cytosol | 40.59 | 43.16 |
| VIT_11s0016g03770.t01 | Wine grape | cytosol | 38.61 | 40.62 |
| VIT_19s0014g03710.t01 | Wine grape | cytosol | 37.62 | 34.86 |
| VIT_01s0011g05480.t01 | Wine grape | cytosol | 33.66 | 26.77 |
| VIT_05s0077g02110.t01 | Wine grape | cytosol | 30.69 | 26.5 |
| VIT_19s0014g02850.t01 | Wine grape | cytosol | 33.66 | 25.19 |
| VIT_16s0022g00440.t01 | Wine grape | cytosol | 33.66 | 22.22 |
| VIT_11s0016g05000.t01 | Wine grape | cytosol, nucleus, plastid | 39.6 | 22.1 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 36.63 | 20.0 |
Protein Annotations
| EntrezGene:100249501 | wikigene:100249501 | Gene3D:3.30.740.10 | MapMan:35.2 | ProteinID:CBI30478 | ProteinID:CBI30478.3 |
| UniProt:D7THG2 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 | GO:GO:0006810 | GO:GO:0007017 |
| GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0010970 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 | GO:GO:0060271 | GO:GO:2000582 |
| InterPro:IPR037177 | EntrezGene:LOC100249501 | wikigene:LOC100249501 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF46 |
| SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI00015C9497 | ArrayExpress:VIT_08s0007g01270 | EnsemblPlantsGene:VIT_08s0007g01270 | EnsemblPlants:VIT_08s0007g01270.t01 |
| RefSeq:XP_002272616 | RefSeq:XP_002272616.1 | : | : | : | : |
Description
Dynein light chain [Source:UniProtKB/TrEMBL;Acc:D7THG2]
Coordinates
chr8:+:15366134..15368434
Molecular Weight (calculated)
11356.6 Da
IEP (calculated)
4.658
GRAVY (calculated)
-0.041
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEAMQNHCL ELAYQALDLH EVCDRQAIAH YIKQKFDEAY GPAWHCVVGV DFGSCITHLC GNFIFFRVET MEFLVFKDGK DLTESKEEAI GVLQGAGKVD
101: S
101: S
1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP
Arabidopsis Description
At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.