Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g01270.t01 | Wine grape | cytosol | 66.96 | 74.26 |
| KRH60274 | Soybean | cytosol | 44.64 | 53.76 |
| KRH41561 | Soybean | cytosol | 43.75 | 52.69 |
| KRH09878 | Soybean | cytosol | 42.86 | 50.53 |
| KRH23441 | Soybean | cytosol | 42.86 | 50.53 |
| KRH25852 | Soybean | cytosol | 25.0 | 47.46 |
| KRH40947 | Soybean | cytosol | 21.43 | 47.06 |
| KRH27167 | Soybean | cytosol | 39.29 | 46.81 |
| KRH55664 | Soybean | cytosol, mitochondrion, peroxisome | 41.96 | 43.12 |
| KRH60372 | Soybean | cytosol | 32.14 | 27.07 |
| KRH41675 | Soybean | cytosol | 31.25 | 26.32 |
| KRH08469 | Soybean | cytosol | 30.36 | 26.15 |
| KRH70126 | Soybean | cytosol | 30.36 | 25.56 |
| KRH37076 | Soybean | cytosol | 25.89 | 24.58 |
| KRH12076 | Soybean | cytosol | 25.0 | 22.95 |
| KRH12077 | Soybean | cytosol | 25.89 | 20.86 |
| KRH27230 | Soybean | cytosol | 27.68 | 20.39 |
| KRH33092 | Soybean | plastid | 24.11 | 18.12 |
| KRH37077 | Soybean | mitochondrion | 25.0 | 17.83 |
| KRH22104 | Soybean | cytosol, plastid | 25.0 | 17.83 |
| KRH03712 | Soybean | cytosol | 37.5 | 17.14 |
| KRH20287 | Soybean | cytosol | 36.61 | 16.8 |
| KRH03396 | Soybean | cytosol | 32.14 | 13.9 |
| KRH56986 | Soybean | cytosol | 31.25 | 13.26 |
| KRH40946 | Soybean | plastid | 11.61 | 11.21 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | EMBL:ACUP02004340 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | EnsemblPlantsGene:GLYMA_07G138900 |
| GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005868 | GO:GO:0005874 |
| GO:GO:0006810 | GO:GO:0007017 | GO:GO:0008092 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 |
| GO:GO:0010970 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0030286 | GO:GO:0045505 | GO:GO:0051959 |
| GO:GO:0060271 | GO:GO:2000582 | InterPro:IPR037177 | UniProt:K7L1L1 | EnsemblPlants:KRH49195 | ProteinID:KRH49195 |
| ProteinID:KRH49195.1 | PFAM:PF01221 | PANTHER:PTHR11886 | PANTHER:PTHR11886:SF46 | SMART:SM01375 | SUPFAM:SSF54648 |
| UniParc:UPI00029610D0 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:16464634..16469155
Molecular Weight (calculated)
12655.1 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.174
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEGKAVVRE TDMPEGMQSY VMELAHQALD AHEVSDCQSI AHFIKQKLDE AYGPAWNSVV GKDFGSCITH LCGSFIFFRV EMMEFLIFKD GKNFTESREE
101: AIGVLQKARN CD
101: AIGVLQKARN CD
1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP
Arabidopsis Description
At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.