CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41561	Soybean	cytosol	97.85	97.85
KRH09878	Soybean	cytosol	78.49	76.84
VIT_11s0016g03770.t01	Wine grape	cytosol	78.49	76.04
KRH23441	Soybean	cytosol	77.42	75.79
GSMUA_Achr2P19900_001	Banana	cytosol	74.19	74.19
GSMUA_Achr10P...	Banana	cytosol	73.12	73.12
GSMUA_Achr7P25190_001	Banana	cytosol	73.12	73.12
GSMUA_Achr7P14400_001	Banana	cytosol	70.97	70.97
KXG33416	Sorghum	cytosol	68.82	68.82
Zm00001d043386_P001	Maize	cytosol	67.74	67.74
TraesCS3D01G296300.1	Wheat	cytosol	68.82	64.65
TraesCS3A01G305600.1	Wheat	cytosol	67.74	63.64
TraesCS3B01G330900.1	Wheat	cytosol	67.74	63.64
TraesCS1D01G203800.1	Wheat	cytosol	66.67	62.63
GSMUA_Achr10P...	Banana	cytosol	67.74	61.76
TraesCS2B01G143000.1	Wheat	cytosol	65.59	61.62
TraesCS2A01G245600.1	Wheat	cytosol	65.59	61.62
TraesCS1B01G110900.1	Wheat	cytosol	65.59	61.62
Os02t0269200-01	Rice	cytosol	65.59	61.62
HORVU3Hr1G073190.1	Barley	cytosol	68.82	61.54
EES06648	Sorghum	cytosol	63.44	59.6
TraesCS2B01G427400.1	Wheat	cytosol	63.44	59.6
TraesCS5B01G340700.1	Wheat	cytosol	63.44	59.6
TraesCS4A01G427300.1	Wheat	cytosol	65.59	58.1
TraesCS7A01G061500.1	Wheat	cytosol	65.59	58.1
TraesCS7D01G056400.1	Wheat	cytosol	65.59	58.1
KRH25852	Soybean	cytosol	36.56	57.63
TraesCS7A01G284100.1	Wheat	cytosol, plastid	51.61	55.17
KRH27167	Soybean	cytosol	51.61	51.06
Zm00001d016016_P001	Maize	cytosol	64.52	50.0
KRH40947	Soybean	cytosol	26.88	49.02
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	54.84	46.79
TraesCS4A01G428300.1	Wheat	cytosol	65.59	45.52
KRH49195	Soybean	cytosol	53.76	44.64
HORVU7Hr1G011400.2	Barley	plastid	65.59	37.65
KRH37076	Soybean	cytosol	39.78	31.36
KRH12076	Soybean	cytosol	38.71	29.51
KRH60372	Soybean	cytosol	39.78	27.82
KRH08469	Soybean	cytosol	38.71	27.69
KRH70126	Soybean	cytosol	38.71	27.07
KRH41675	Soybean	cytosol	38.71	27.07
KRH12077	Soybean	cytosol	39.78	26.62
KRH27230	Soybean	cytosol	38.71	23.68
KRH37077	Soybean	mitochondrion	38.71	22.93
KRH22104	Soybean	cytosol, plastid	36.56	21.66
KRH03712	Soybean	cytosol	46.24	17.55
KRH33092	Soybean	plastid	27.96	17.45
KRH20287	Soybean	cytosol	45.16	17.21
KRH03396	Soybean	cytosol	40.86	14.67
KRH56986	Soybean	cytosol	40.86	14.39
KRH40946	Soybean	plastid	13.98	11.21

Protein Annotations

EntrezGene:100499739	Gene3D:3.30.740.10	MapMan:35.2	EMBL:ACUP02003357	InterPro:DLC_sf	InterPro:Dynein_light_chain_typ-1/2
EnsemblPlantsGene:GLYMA_05G230400	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005868
GO:GO:0005874	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092	GO:GO:0008150	GO:GO:0008574
GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787	GO:GO:0030286	GO:GO:0045505
GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177	UniProt:K7KRN5	EnsemblPlants:KRH60274
ProteinID:KRH60274	ProteinID:KRH60274.1	PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF47	SMART:SM01375
SUPFAM:SSF54648	UniParc:UPI00023C4158	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:40828680..40829883

Molecular Weight (calculated)

10310.3 Da

IEP (calculated)

5.509

GRAVY (calculated)

0.140

Length

93 amino acids

Sequence
(BLAST)

1: MLEGKAMVKE TDMSPKMQIH AMASASQALD LYDVYDCISI AAHIKKEFDS VYGNGWQCVV GSNFGCYFTH SSGTFIYFAL ETLNFLIFKG TSS

Best Arabidopsis Sequence Match ( AT1G52245.1 )
(BLAST)

1: MLEGKAMVED SDMPVKMQMQ AMAFASQALD LFDVFDCKSI AGHIKKEFDE RYGSGWQCVV GSNFGCFFTH SKGTFIYFQL ETLKFLIFKG ASTP

Arabidopsis Description

At1g52250 [Source:UniProtKB/TrEMBL;Acc:Q9M810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.