CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40947	Soybean	cytosol	34.23	100.0
Bra020085.1-P	Field mustard	cytosol, mitochondrion, plastid	30.2	46.88
KRH20287	Soybean	cytosol	50.34	30.74
KRH03712	Soybean	cytosol	49.66	30.2
KRH27167	Soybean	cytosol	18.79	29.79
KRH23441	Soybean	cytosol	18.12	28.42
KRH09878	Soybean	cytosol	18.12	28.42
VIT_11s0016g05000.t01	Wine grape	cytosol, nucleus, plastid	34.23	28.18
KRH60274	Soybean	cytosol	17.45	27.96
KRH08469	Soybean	cytosol	24.16	27.69
KRH55664	Soybean	cytosol, mitochondrion, peroxisome	20.13	27.52
KRH70126	Soybean	cytosol	24.16	27.07
KRH41561	Soybean	cytosol	16.78	26.88
KRH41675	Soybean	cytosol	22.82	25.56
KRH60372	Soybean	cytosol	22.82	25.56
KRH49195	Soybean	cytosol	18.12	24.11
CDX88858	Canola	nucleus, plastid	32.89	23.45
Bra006541.1-P	Field mustard	nucleus	32.89	23.45
CDY45106	Canola	nucleus	32.89	23.33
CDX70914	Canola	nucleus	32.89	23.22
Solyc12g006630.1.1	Tomato	cytosol	34.9	23.21
KRH37076	Soybean	cytosol	18.12	22.88
AT5G20110.1	Thale cress	cytosol	31.54	22.49
KRH12076	Soybean	cytosol	18.12	22.13
PGSC0003DMT400053284	Potato	cytosol	34.23	22.08
KRH22104	Soybean	cytosol, plastid	20.81	19.75
KRH12077	Soybean	cytosol	18.12	19.42
KRH27230	Soybean	cytosol	19.46	19.08
KRH37077	Soybean	mitochondrion	18.79	17.83
KRH56986	Soybean	cytosol	31.54	17.8
KRH03396	Soybean	cytosol	30.2	17.37
KRH25852	Soybean	cytosol	5.37	13.56
KRH40946	Soybean	plastid	7.38	9.48

Protein Annotations

Gene3D:3.30.740.10	MapMan:35.2	UniProt:A0A0R0I298	EMBL:ACUP02006318	InterPro:DLC_sf	InterPro:Dynein_light_chain_typ-1/2
EnsemblPlantsGene:GLYMA_10G0991001	GO:GO:0003674	GO:GO:0003774	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005868
GO:GO:0005874	GO:GO:0006810	GO:GO:0007017	GO:GO:0008092	GO:GO:0008150	GO:GO:0008574
GO:GO:0009987	GO:GO:0010970	GO:GO:0016043	GO:GO:0016787	GO:GO:0030286	GO:GO:0045505
GO:GO:0051959	GO:GO:0060271	GO:GO:2000582	InterPro:IPR037177	EnsemblPlants:KRH33092	ProteinID:KRH33092
ProteinID:KRH33092.1	PFAM:PF01221	PANTHER:PTHR11886	PANTHER:PTHR11886:SF51	SMART:SM01375	SUPFAM:SSF54648
UniParc:UPI0006EDFA13	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:17416733..17424774

Molecular Weight (calculated)

17064.7 Da

IEP (calculated)

11.376

GRAVY (calculated)

-0.235

Length

149 amino acids

Sequence
(BLAST)

001: VTVICFLIAK AHTSLLTHSA AHTKPFLSHS LGKREASTVC TRWVLHRRQR PVAEDRVPFA LGVRIGQRSF SALRWDAKPL QQSAPRRSRT PLRRHRNQEF
101: DKAYGPVWHC IVGSNFGSFV THSTGCFLYF SMENLYILLF KTKVKKALD

Best Arabidopsis Sequence Match ( AT5G20110.1 )
(BLAST)

001: MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH

Arabidopsis Description

At5g20110 [Source:UniProtKB/TrEMBL;Acc:Q6NM36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.